Marchal K - Search Results

1

Low immunogenicity of common cancer hot spot mutations resulting in false immunogenic selection signals.

Claeys A, Luijts T, Marchal K, Van den Eynden J. Claeys A, et al. Among authors: marchal k. PLoS Genet. 2021 Feb 8;17(2):e1009368. doi: 10.1371/journal.pgen.1009368. eCollection 2021 Feb. PLoS Genet. 2021. PMID: 33556087 Free PMC article.

2

SomInaClust: detection of cancer genes based on somatic mutation patterns of inactivation and clustering.

Van den Eynden J, Fierro AC, Verbeke LP, Marchal K. Van den Eynden J, et al. Among authors: marchal k. BMC Bioinformatics. 2015 Apr 23;16:125. doi: 10.1186/s12859-015-0555-7. BMC Bioinformatics. 2015. PMID: 25903787 Free PMC article.

3

Pathway Relevance Ranking for Tumor Samples through Network-Based Data Integration.

Verbeke LP, Van den Eynden J, Fierro AC, Demeester P, Fostier J, Marchal K. Verbeke LP, et al. Among authors: marchal k. PLoS One. 2015 Jul 28;10(7):e0133503. doi: 10.1371/journal.pone.0133503. eCollection 2015. PLoS One. 2015. PMID: 26217958 Free PMC article.

4

Simultaneous discovery of cancer subtypes and subtype features by molecular data integration.

Le Van T, van Leeuwen M, Carolina Fierro A, De Maeyer D, Van den Eynden J, Verbeke L, De Raedt L, Marchal K, Nijssen S. Le Van T, et al. Among authors: marchal k. Bioinformatics. 2016 Sep 1;32(17):i445-i454. doi: 10.1093/bioinformatics/btw434. Bioinformatics. 2016. PMID: 27587661

5

Network-Based Analysis to Identify Drivers of Metastatic Prostate Cancer Using GoNetic.

de Schaetzen van Brienen L, Miclotte G, Larmuseau M, Van den Eynden J, Marchal K. de Schaetzen van Brienen L, et al. Among authors: marchal k. Cancers (Basel). 2021 Oct 21;13(21):5291. doi: 10.3390/cancers13215291. Cancers (Basel). 2021. PMID: 34771455 Free PMC article.

6

Adaptation to High Ethanol Reveals Complex Evolutionary Pathways.

Voordeckers K, Kominek J, Das A, Espinosa-Cantú A, De Maeyer D, Arslan A, Van Pee M, van der Zande E, Meert W, Yang Y, Zhu B, Marchal K, DeLuna A, Van Noort V, Jelier R, Verstrepen KJ. Voordeckers K, et al. Among authors: marchal k. PLoS Genet. 2015 Nov 6;11(11):e1005635. doi: 10.1371/journal.pgen.1005635. eCollection 2015 Nov. PLoS Genet. 2015. PMID: 26545090 Free PMC article.

7

Network-Based Analysis of eQTL Data to Prioritize Driver Mutations.

De Maeyer D, Weytjens B, De Raedt L, Marchal K. De Maeyer D, et al. Among authors: marchal k. Genome Biol Evol. 2016 Jan 23;8(3):481-94. doi: 10.1093/gbe/evw010. Genome Biol Evol. 2016. PMID: 26802430 Free PMC article.

8

SSA-ME Detection of cancer driver genes using mutual exclusivity by small subnetwork analysis.

Pulido-Tamayo S, Weytjens B, De Maeyer D, Marchal K. Pulido-Tamayo S, et al. Among authors: marchal k. Sci Rep. 2016 Nov 3;6:36257. doi: 10.1038/srep36257. Sci Rep. 2016. PMID: 27808240 Free PMC article.

9

IAMBEE: a web-service for the identification of adaptive pathways from parallel evolved clonal populations.

Perez-Romero CA, Weytjens B, Decap D, Swings T, Michiels J, De Maeyer D, Marchal K. Perez-Romero CA, et al. Among authors: marchal k. Nucleic Acids Res. 2019 Jul 2;47(W1):W151-W157. doi: 10.1093/nar/gkz451. Nucleic Acids Res. 2019. PMID: 31127271 Free PMC article.

10

Pathway and network analysis of more than 2500 whole cancer genomes.

Reyna MA, Haan D, Paczkowska M, Verbeke LPC, Vazquez M, Kahraman A, Pulido-Tamayo S, Barenboim J, Wadi L, Dhingra P, Shrestha R, Getz G, Lawrence MS, Pedersen JS, Rubin MA, Wheeler DA, Brunak S, Izarzugaza JMG, Khurana E, Marchal K, von Mering C, Sahinalp SC, Valencia A; PCAWG Drivers and Functional Interpretation Working Group; Reimand J, Stuart JM, Raphael BJ; PCAWG Consortium. Reyna MA, et al. Among authors: marchal k. Nat Commun. 2020 Feb 5;11(1):729. doi: 10.1038/s41467-020-14367-0. Nat Commun. 2020. PMID: 32024854 Free PMC article.

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