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Increasing sustainability in palaeoproteomics by optimizing digestion times for large-scale archaeological bone analyses.
iScience. 2024 Mar 11;27(4):109432. doi: 10.1016/j.isci.2024.109432. eCollection 2024 Apr 19.
iScience. 2024.
PMID: 38550979
Free PMC article.
Digging deeper into ancient skeletal proteomes through consecutive digestion with multiple proteases.
Fagernäs Z, Troché G, Olsen JV, Welker F.
Fagernäs Z, et al.
J Proteomics. 2024 Apr 30;298:105143. doi: 10.1016/j.jprot.2024.105143. Epub 2024 Feb 27.
J Proteomics. 2024.
PMID: 38423353
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Comparing extraction method efficiency for high-throughput palaeoproteomic bone species identification.
Mylopotamitaki D, Harking FS, Taurozzi AJ, Fagernäs Z, Godinho RM, Smith GM, Weiss M, Schüler T, McPherron SP, Meller H, Cascalheira J, Bicho N, Olsen JV, Hublin JJ, Welker F.
Mylopotamitaki D, et al. Among authors: fagernas z.
Sci Rep. 2023 Oct 26;13(1):18345. doi: 10.1038/s41598-023-44885-y.
Sci Rep. 2023.
PMID: 37884544
Free PMC article.
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A glimpse of the paleome in endolithic microbial communities.
Wegner CE, Stahl R, Velsko I, Hübner A, Fagernäs Z, Warinner C, Lehmann R, Ritschel T, Totsche KU, Küsel K.
Wegner CE, et al. Among authors: fagernas z.
Microbiome. 2023 Sep 25;11(1):210. doi: 10.1186/s40168-023-01647-2.
Microbiome. 2023.
PMID: 37749660
Free PMC article.
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Understanding the microbial biogeography of ancient human dentitions to guide study design and interpretation.
Fagernäs Z, Salazar-García DC, Haber Uriarte M, Avilés Fernández A, Henry AG, Lomba Maurandi J, Ozga AT, Velsko IM, Warinner C.
Fagernäs Z, et al.
FEMS Microbes. 2022 Mar 3;3:xtac006. doi: 10.1093/femsmc/xtac006. eCollection 2022.
FEMS Microbes. 2022.
PMID: 37332506
Free PMC article.
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Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager.
Fellows Yates JA, Lamnidis TC, Borry M, Andrades Valtueña A, Fagernäs Z, Clayton S, Garcia MU, Neukamm J, Peltzer A.
Fellows Yates JA, et al. Among authors: fagernas z.
PeerJ. 2021 Mar 16;9:e10947. doi: 10.7717/peerj.10947. eCollection 2021.
PeerJ. 2021.
PMID: 33777521
Free PMC article.
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