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A spatially resolved single cell genomic atlas of the adult human breast.
Kumar T, Nee K, Wei R, He S, Nguyen QH, Bai S, Blake K, Gong Y, Pein M, Sei E, Hu M, Casasent A, Thennavan A, Li J, Tran T, Chen K, Nilges B, Kashikar N, Braubach O, Cheikh BB, Nikulina N, Chen H, Teshome M, Menegaz B, Javaid H, Nagi C, Montalvan J, Tifrea DF, Edwards R, Lin E, Parajuli R, Winocour S, Thompson A, Lim B, Lawson DA, Kessenbrock K, Navin N. Kumar T, et al. Among authors: cheikh bb. bioRxiv [Preprint]. 2023 Apr 25:2023.04.22.537946. doi: 10.1101/2023.04.22.537946. bioRxiv. 2023. Update in: Nature. 2023 Aug;620(7972):181-191. doi: 10.1038/s41586-023-06252-9. PMID: 37163043 Free PMC article. Updated. Preprint.
Compartmentalized spatial profiling of the tumor microenvironment in head and neck squamous cell carcinoma identifies immune checkpoint molecules and tumor necrosis factor receptor superfamily members as biomarkers of response to immunotherapy.
Sadeghirad H, Liu N, Monkman J, Ma N, Cheikh BB, Jhaveri N, Tan CW, Warkiani ME, Adams MN, Nguyen Q, Ladwa R, Braubach O, O'Byrne K, Davis M, Hughes BGM, Kulasinghe A. Sadeghirad H, et al. Among authors: cheikh bb. Front Immunol. 2023 Apr 3;14:1135489. doi: 10.3389/fimmu.2023.1135489. eCollection 2023. Front Immunol. 2023. PMID: 37153589 Free PMC article.
Gland segmentation in colon histology images: The glas challenge contest.
Sirinukunwattana K, Pluim JPW, Chen H, Qi X, Heng PA, Guo YB, Wang LY, Matuszewski BJ, Bruni E, Sanchez U, Böhm A, Ronneberger O, Cheikh BB, Racoceanu D, Kainz P, Pfeiffer M, Urschler M, Snead DRJ, Rajpoot NM. Sirinukunwattana K, et al. Among authors: cheikh bb. Med Image Anal. 2017 Jan;35:489-502. doi: 10.1016/j.media.2016.08.008. Epub 2016 Sep 3. Med Image Anal. 2017. PMID: 27614792 Review.