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Community-based benchmarking improves spike rate inference from two-photon calcium imaging data.
Berens P, Freeman J, Deneux T, Chenkov N, McColgan T, Speiser A, Macke JH, Turaga SC, Mineault P, Rupprecht P, Gerhard S, Friedrich RW, Friedrich J, Paninski L, Pachitariu M, Harris KD, Bolte B, Machado TA, Ringach D, Stone J, Rogerson LE, Sofroniew NJ, Reimer J, Froudarakis E, Euler T, Román Rosón M, Theis L, Tolias AS, Bethge M. Berens P, et al. Among authors: macke jh. PLoS Comput Biol. 2018 May 21;14(5):e1006157. doi: 10.1371/journal.pcbi.1006157. eCollection 2018 May. PLoS Comput Biol. 2018. PMID: 29782491 Free PMC article.
Estimation of skeletal kinematics in freely moving rodents.
Monsees A, Voit KM, Wallace DJ, Sawinski J, Charyasz E, Scheffler K, Macke JH, Kerr JND. Monsees A, et al. Among authors: macke jh. Nat Methods. 2022 Nov;19(11):1500-1509. doi: 10.1038/s41592-022-01634-9. Epub 2022 Oct 17. Nat Methods. 2022. PMID: 36253644 Free PMC article.
Crowdsourced analysis of clinical trial data to predict amyotrophic lateral sclerosis progression.
Küffner R, Zach N, Norel R, Hawe J, Schoenfeld D, Wang L, Li G, Fang L, Mackey L, Hardiman O, Cudkowicz M, Sherman A, Ertaylan G, Grosse-Wentrup M, Hothorn T, van Ligtenberg J, Macke JH, Meyer T, Schölkopf B, Tran L, Vaughan R, Stolovitzky G, Leitner ML. Küffner R, et al. Among authors: macke jh. Nat Biotechnol. 2015 Jan;33(1):51-7. doi: 10.1038/nbt.3051. Epub 2014 Nov 2. Nat Biotechnol. 2015. PMID: 25362243
Bayesian population decoding of spiking neurons.
Gerwinn S, Macke J, Bethge M. Gerwinn S, et al. Front Comput Neurosci. 2009 Oct 28;3:21. doi: 10.3389/neuro.10.021.2009. eCollection 2009. Front Comput Neurosci. 2009. PMID: 20011217 Free PMC article.
42 results