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Supramolecular self assembly of nanodrill-like structures for intracellular delivery.
Ashwanikumar N, Plaut JS, Mostofian B, Patel S, Kwak P, Sun C, McPhail K, Zuckerman DM, Esener SC, Sahay G. Ashwanikumar N, et al. Among authors: zuckerman dm. J Control Release. 2018 Jul 28;282:76-89. doi: 10.1016/j.jconrel.2018.02.041. Epub 2018 Mar 1. J Control Release. 2018. PMID: 29501722 Free PMC article.
Computational Estimation of Microsecond to Second Atomistic Folding Times.
Adhikari U, Mostofian B, Copperman J, Subramanian SR, Petersen AA, Zuckerman DM. Adhikari U, et al. Among authors: zuckerman dm. J Am Chem Soc. 2019 Apr 24;141(16):6519-6526. doi: 10.1021/jacs.8b10735. Epub 2019 Apr 12. J Am Chem Soc. 2019. PMID: 30892023 Free PMC article.
A Suite of Tutorials for the WESTPA Rare-Events Sampling Software [Article v1.0].
Bogetti AT, Mostofian B, Dickson A, Pratt AJ, Saglam AS, Harrison PO, Adelman JL, Dudek M, Torrillo PA, DeGrave AJ, Adhikari U, Zwier MC, Zuckerman DM, Chong LT. Bogetti AT, et al. Among authors: zuckerman dm. Living J Comput Mol Sci. 2019;1(2):10607. doi: 10.33011/livecoms.1.2.10607. Epub 2019 Oct 4. Living J Comput Mol Sci. 2019. PMID: 32395705 Free PMC article.
WESTPA 2.0: High-Performance Upgrades for Weighted Ensemble Simulations and Analysis of Longer-Timescale Applications.
Russo JD, Zhang S, Leung JMG, Bogetti AT, Thompson JP, DeGrave AJ, Torrillo PA, Pratt AJ, Wong KF, Xia J, Copperman J, Adelman JL, Zwier MC, LeBard DN, Zuckerman DM, Chong LT. Russo JD, et al. Among authors: zuckerman dm. J Chem Theory Comput. 2022 Feb 8;18(2):638-649. doi: 10.1021/acs.jctc.1c01154. Epub 2022 Jan 19. J Chem Theory Comput. 2022. PMID: 35043623 Free PMC article.
Ligand-mediated Structural Dynamics of a Mammalian Pancreatic KATP Channel.
Sung MW, Driggers CM, Mostofian B, Russo JD, Patton BL, Zuckerman DM, Shyng SL. Sung MW, et al. Among authors: zuckerman dm. J Mol Biol. 2022 Oct 15;434(19):167789. doi: 10.1016/j.jmb.2022.167789. Epub 2022 Aug 11. J Mol Biol. 2022. PMID: 35964676 Free PMC article.
139 results