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PanTools v3: functional annotation, classification and phylogenomics.
Jonkheer EM, van Workum DM, Sheikhizadeh Anari S, Brankovics B, de Haan JR, Berke L, van der Lee TAJ, de Ridder D, Smit S. Jonkheer EM, et al. Among authors: van der lee taj. Bioinformatics. 2022 Sep 15;38(18):4403-4405. doi: 10.1093/bioinformatics/btac506. Bioinformatics. 2022. PMID: 35861394 Free PMC article.
The Pectobacterium pangenome, with a focus on Pectobacterium brasiliense, shows a robust core and extensive exchange of genes from a shared gene pool.
Jonkheer EM, Brankovics B, Houwers IM, van der Wolf JM, Bonants PJM, Vreeburg RAM, Bollema R, de Haan JR, Berke L, Smit S, de Ridder D, van der Lee TAJ. Jonkheer EM, et al. Among authors: van der lee taj. BMC Genomics. 2021 Apr 14;22(1):265. doi: 10.1186/s12864-021-07583-5. BMC Genomics. 2021. PMID: 33849459 Free PMC article.
The Synchytrium endobioticum AvrSen1 Triggers a Hypersensitive Response in Sen1 Potatoes While Natural Variants Evade Detection.
van de Vossenberg BTLH, Prodhomme C, van Arkel G, van Gent-Pelzer MPE, Bergervoet M, Brankovics B, Przetakiewicz J, Visser RGF, van der Lee TAJ, Vossen JH. van de Vossenberg BTLH, et al. Among authors: van arkel g, van gent pelzer mpe, van der lee taj. Mol Plant Microbe Interact. 2019 Nov;32(11):1536-1546. doi: 10.1094/MPMI-05-19-0138-R. Epub 2019 Sep 17. Mol Plant Microbe Interact. 2019. PMID: 31246152 Free article.
90 results