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Leveraging electronic health records for data science: common pitfalls and how to avoid them.
Lancet Digit Health. 2022 Dec;4(12):e893-e898. doi: 10.1016/S2589-7500(22)00154-6. Epub 2022 Sep 22.
Lancet Digit Health. 2022.
PMID: 36154811
Free article.
Review.
Intraoperative prediction of postanaesthesia care unit hypotension.
Palla K, Hyland SL, Posner K, Ghosh P, Nair B, Bristow M, Paleva Y, Williams B, Fong C, Van Cleve W, Long DR, Pauldine R, O'Hara K, Takeda K, Vavilala MS.
Palla K, et al. Among authors: hyland sl.
Br J Anaesth. 2022 Apr;128(4):623-635. doi: 10.1016/j.bja.2021.10.052. Epub 2021 Dec 17.
Br J Anaesth. 2022.
PMID: 34924175
Free PMC article.
Item in Clipboard
Missing data was handled inconsistently in UK prediction models: a review of method used.
Tsvetanova A, Sperrin M, Peek N, Buchan I, Hyland S, Martin GP.
Tsvetanova A, et al.
J Clin Epidemiol. 2021 Dec;140:149-158. doi: 10.1016/j.jclinepi.2021.09.008. Epub 2021 Sep 11.
J Clin Epidemiol. 2021.
PMID: 34520847
Review.
Item in Clipboard
Sociodemographic and clinical features predictive of SARS-CoV-2 test positivity across healthcare visit-types.
Phuong J, Hyland SL, Mooney SJ, Long DR, Takeda K, Vavilala MS, O'Hara K.
Phuong J, et al. Among authors: hyland sl.
PLoS One. 2021 Oct 14;16(10):e0258339. doi: 10.1371/journal.pone.0258339. eCollection 2021.
PLoS One. 2021.
PMID: 34648552
Free PMC article.
Item in Clipboard
Early prediction of circulatory failure in the intensive care unit using machine learning.
Hyland SL, Faltys M, Hüser M, Lyu X, Gumbsch T, Esteban C, Bock C, Horn M, Moor M, Rieck B, Zimmermann M, Bodenham D, Borgwardt K, Rätsch G, Merz TM.
Hyland SL, et al.
Nat Med. 2020 Mar;26(3):364-373. doi: 10.1038/s41591-020-0789-4. Epub 2020 Mar 9.
Nat Med. 2020.
PMID: 32152583
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Identification of active transcriptional regulatory elements from GRO-seq data.
Danko CG, Hyland SL, Core LJ, Martins AL, Waters CT, Lee HW, Cheung VG, Kraus WL, Lis JT, Siepel A.
Danko CG, et al. Among authors: hyland sl.
Nat Methods. 2015 May;12(5):433-8. doi: 10.1038/nmeth.3329. Epub 2015 Mar 23.
Nat Methods. 2015.
PMID: 25799441
Free PMC article.
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A global metagenomic map of urban microbiomes and antimicrobial resistance.
Danko D, Bezdan D, Afshin EE, Ahsanuddin S, Bhattacharya C, Butler DJ, Chng KR, Donnellan D, Hecht J, Jackson K, Kuchin K, Karasikov M, Lyons A, Mak L, Meleshko D, Mustafa H, Mutai B, Neches RY, Ng A, Nikolayeva O, Nikolayeva T, Png E, Ryon KA, Sanchez JL, Shaaban H, Sierra MA, Thomas D, Young B, Abudayyeh OO, Alicea J, Bhattacharyya M, Blekhman R, Castro-Nallar E, Cañas AM, Chatziefthimiou AD, Crawford RW, De Filippis F, Deng Y, Desnues C, Dias-Neto E, Dybwad M, Elhaik E, Ercolini D, Frolova A, Gankin D, Gootenberg JS, Graf AB, Green DC, Hajirasouliha I, Hastings JJA, Hernandez M, Iraola G, Jang S, Kahles A, Kelly FJ, Knights K, Kyrpides NC, Łabaj PP, Lee PKH, Leung MHY, Ljungdahl PO, Mason-Buck G, McGrath K, Meydan C, Mongodin EF, Moraes MO, Nagarajan N, Nieto-Caballero M, Noushmehr H, Oliveira M, Ossowski S, Osuolale OO, Özcan O, Paez-Espino D, Rascovan N, Richard H, Rätsch G, Schriml LM, Semmler T, Sezerman OU, Shi L, Shi T, Siam R, Song LH, Suzuki H, Court DS, Tighe SW, Tong X, Udekwu KI, Ugalde JA, Valentine B, Vassilev DI, Vayndorf EM, Velavan TP, Wu J, Zambrano MM, Zhu J, Zhu S, Mason CE; International MetaSUB Consortium.
Danko D, et al.
Cell. 2021 Jun 24;184(13):3376-3393.e17. doi: 10.1016/j.cell.2021.05.002. Epub 2021 May 26.
Cell. 2021.
PMID: 34043940
Free PMC article.
Item in Clipboard
Compatibility in Missing Data Handling Across the Prediction Model Pipeline: A Simulation Study.
Tsvetanova A, Sperrin M, Jenkins D, Peek N, Buchan I, Hyland S, Martin G.
Tsvetanova A, et al.
Stud Health Technol Inform. 2024 Jan 25;310:1476-1477. doi: 10.3233/SHTI231252.
Stud Health Technol Inform. 2024.
PMID: 38269704
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