Watson CT - Search Results

1

ImmunoTyper-SR: A computational approach for genotyping immunoglobulin heavy chain variable genes using short-read data.

Ford MKB, Hari A, Rodriguez O, Xu J, Lack J, Oguz C, Zhang Y, Weber S, Magliocco M, Barnett J, Xirasagar S, Samuel S, Imberti L, Bonfanti P, Biondi A, Dalgard CL, Chanock S, Rosen L, Holland S, Su H, Notarangelo L; NIAID COVID Consortium; Vishkin U, Watson CT, Sahinalp SC. Ford MKB, et al. Among authors: watson ct. Cell Syst. 2022 Oct 19;13(10):808-816.e5. doi: 10.1016/j.cels.2022.08.008. Cell Syst. 2022. PMID: 36265467 Free PMC article.

2

Genotyping and Copy Number Analysis of Immunoglobin Heavy Chain Variable Genes Using Long Reads.

Ford M, Haghshenas E, Watson CT, Sahinalp SC. Ford M, et al. Among authors: watson ct. iScience. 2020 Mar 27;23(3):100883. doi: 10.1016/j.isci.2020.100883. Epub 2020 Feb 4. iScience. 2020. PMID: 32109676 Free PMC article.

3

Erratum: Genotyping and Copy Number Analysis of Immunoglobulin Heavy Chain Variable Genes Using Long Reads.

Ford M, Haghshenas E, Watson CT, Sahinalp SC. Ford M, et al. Among authors: watson ct. iScience. 2020 Sep 4;23(9):101508. doi: 10.1016/j.isci.2020.101508. eCollection 2020 Sep 25. iScience. 2020. PMID: 32896768 Free PMC article.

4

A Novel Framework for Characterizing Genomic Haplotype Diversity in the Human Immunoglobulin Heavy Chain Locus.

Rodriguez OL, Gibson WS, Parks T, Emery M, Powell J, Strahl M, Deikus G, Auckland K, Eichler EE, Marasco WA, Sebra R, Sharp AJ, Smith ML, Bashir A, Watson CT. Rodriguez OL, et al. Among authors: watson ct. Front Immunol. 2020 Sep 23;11:2136. doi: 10.3389/fimmu.2020.02136. eCollection 2020. Front Immunol. 2020. PMID: 33072076 Free PMC article.

5

Limitations of lymphoblastoid cell lines for establishing genetic reference datasets in the immunoglobulin loci.

Rodriguez OL, Sharp AJ, Watson CT. Rodriguez OL, et al. Among authors: watson ct. PLoS One. 2021 Dec 13;16(12):e0261374. doi: 10.1371/journal.pone.0261374. eCollection 2021. PLoS One. 2021. PMID: 34898642 Free PMC article.

6

T cell receptor beta germline variability is revealed by inference from repertoire data.

Omer A, Peres A, Rodriguez OL, Watson CT, Lees W, Polak P, Collins AM, Yaari G. Omer A, et al. Among authors: watson ct. Genome Med. 2022 Jan 7;14(1):2. doi: 10.1186/s13073-021-01008-4. Genome Med. 2022. PMID: 34991709 Free PMC article.

7

Characterization of the immunoglobulin lambda chain locus from diverse populations reveals extensive genetic variation.

Gibson WS, Rodriguez OL, Shields K, Silver CA, Dorgham A, Emery M, Deikus G, Sebra R, Eichler EE, Bashir A, Smith ML, Watson CT. Gibson WS, et al. Among authors: watson ct. Genes Immun. 2023 Feb;24(1):21-31. doi: 10.1038/s41435-022-00188-2. Epub 2022 Dec 21. Genes Immun. 2023. PMID: 36539592 Free PMC article.

8

FLAIRR-Seq: A Method for Single-Molecule Resolution of Near Full-Length Antibody H Chain Repertoires.

Ford EE, Tieri D, Rodriguez OL, Francoeur NJ, Soto J, Kos JT, Peres A, Gibson WS, Silver CA, Deikus G, Hudson E, Woolley CR, Beckmann N, Charney A, Mitchell TC, Yaari G, Sebra RP, Watson CT, Smith ML. Ford EE, et al. Among authors: watson ct. J Immunol. 2023 May 15;210(10):1607-1619. doi: 10.4049/jimmunol.2200825. J Immunol. 2023. PMID: 37027017 Free PMC article.

9

Genetic variation in the immunoglobulin heavy chain locus shapes the human antibody repertoire.

Rodriguez OL, Safonova Y, Silver CA, Shields K, Gibson WS, Kos JT, Tieri D, Ke H, Jackson KJL, Boyd SD, Smith ML, Marasco WA, Watson CT. Rodriguez OL, et al. Among authors: watson ct. Nat Commun. 2023 Jul 21;14(1):4419. doi: 10.1038/s41467-023-40070-x. Nat Commun. 2023. PMID: 37479682 Free PMC article.

10

Peres A, Lees WD, Rodriguez OL, Lee NY, Polak P, Hope R, Kedmi M, Collins AM, Ohlin M, Kleinstein SH, Watson CT, Yaari G. Peres A, et al. Among authors: watson ct. Nucleic Acids Res. 2023 Sep 8;51(16):e86. doi: 10.1093/nar/gkad603. Nucleic Acids Res. 2023. PMID: 37548401 Free PMC article.

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