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Conformational change of the Bordetella response regulator BvgA accompanies its activation of the B. pertussis virulence gene fhaB.
Kim D, Tracey J, Becerra Flores M, Chaudhry K, Nasim R, Correa-Medina A, Knipling L, Chen Q, Stibitz S, Jenkins LMM, Moon K, Cardozo T, Hinton DM. Kim D, et al. Comput Struct Biotechnol J. 2022 Nov 6;20:6431-6442. doi: 10.1016/j.csbj.2022.10.042. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 36467586 Free PMC article.
The BvgAS Regulon of Bordetella pertussis.
Moon K, Bonocora RP, Kim DD, Chen Q, Wade JT, Stibitz S, Hinton DM. Moon K, et al. Among authors: kim dd. mBio. 2017 Oct 10;8(5):e01526-17. doi: 10.1128/mBio.01526-17. mBio. 2017. PMID: 29018122 Free PMC article.
Identification of BvgA-Dependent and BvgA-Independent Small RNAs (sRNAs) in Bordetella pertussis Using the Prokaryotic sRNA Prediction Toolkit ANNOgesic.
Moon K, Sim M, Tai CH, Yoo K, Merzbacher C, Yu SH, Kim DD, Lee J, Förstner KU, Chen Q, Stibitz S, Knipling LG, Hinton DM. Moon K, et al. Among authors: kim dd. Microbiol Spectr. 2021 Oct 31;9(2):e0004421. doi: 10.1128/Spectrum.00044-21. Epub 2021 Sep 22. Microbiol Spectr. 2021. PMID: 34550019 Free PMC article.
Critical assessment of missense variant effect predictors on disease-relevant variant data.
Rastogi R, Chung R, Li S, Li C, Lee K, Woo J, Kim DW, Keum C, Babbi G, Martelli PL, Savojardo C, Casadio R, Chennen K, Weber T, Poch O, Ancien F, Cia G, Pucci F, Raimondi D, Vranken W, Rooman M, Marquet C, Olenyi T, Rost B, Andreoletti G, Kamandula A, Peng Y, Bakolitsa C, Mort M, Cooper DN, Bergquist T, Pejaver V, Liu X, Radivojac P, Brenner SE, Ioannidis NM. Rastogi R, et al. Among authors: kim dw. bioRxiv [Preprint]. 2024 Jun 8:2024.06.06.597828. doi: 10.1101/2024.06.06.597828. bioRxiv. 2024. PMID: 38895200 Free PMC article. Preprint.
Enhanced IL-12 transgene expression improves oncolytic viroimmunotherapy.
Kim Y, Saini U, Kim D, Hernandez-Aguirre I, Hedberg J, Martin A, Mo X, Cripe TP, Markert J, Cassady KA, Dhital R. Kim Y, et al. Among authors: kim d. Front Immunol. 2024 Jun 4;15:1375413. doi: 10.3389/fimmu.2024.1375413. eCollection 2024. Front Immunol. 2024. PMID: 38895115 Free PMC article.
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