Barash Y - Search Results

1

RNA splicing analysis using heterogeneous and large RNA-seq datasets.

Vaquero-Garcia J, Aicher JK, Jewell S, Gazzara MR, Radens CM, Jha A, Norton SS, Lahens NF, Grant GR, Barash Y. Vaquero-Garcia J, et al. Among authors: barash y. Nat Commun. 2023 Mar 3;14(1):1230. doi: 10.1038/s41467-023-36585-y. Nat Commun. 2023. PMID: 36869033 Free PMC article.

2

Functional coordination of alternative splicing in the mammalian central nervous system.

Fagnani M, Barash Y, Ip JY, Misquitta C, Pan Q, Saltzman AL, Shai O, Lee L, Rozenhek A, Mohammad N, Willaime-Morawek S, Babak T, Zhang W, Hughes TR, van der Kooy D, Frey BJ, Blencowe BJ. Fagnani M, et al. Among authors: barash y. Genome Biol. 2007;8(6):R108. doi: 10.1186/gb-2007-8-6-r108. Genome Biol. 2007. PMID: 17565696 Free PMC article.

3

Context-specific Bayesian clustering for gene expression data.

Barash Y, Friedman N. Barash Y, et al. J Comput Biol. 2002;9(2):169-91. doi: 10.1089/10665270252935403. J Comput Biol. 2002. PMID: 12015876

4

Sfp1 is a stress- and nutrient-sensitive regulator of ribosomal protein gene expression.

Marion RM, Regev A, Segal E, Barash Y, Koller D, Friedman N, O'Shea EK. Marion RM, et al. Among authors: barash y. Proc Natl Acad Sci U S A. 2004 Oct 5;101(40):14315-22. doi: 10.1073/pnas.0405353101. Epub 2004 Sep 7. Proc Natl Acad Sci U S A. 2004. PMID: 15353587 Free PMC article.

5

An illuminated view of molecular biology.

Barash Y, Wang X. Barash Y, et al. Genome Biol. 2010;11(8):307. doi: 10.1186/gb-2010-11-8-307. Epub 2010 Aug 26. Genome Biol. 2010. PMID: 20804575 Free PMC article.

6

Deciphering the splicing code.

Barash Y, Calarco JA, Gao W, Pan Q, Wang X, Shai O, Blencowe BJ, Frey BJ. Barash Y, et al. Nature. 2010 May 6;465(7294):53-9. doi: 10.1038/nature09000. Nature. 2010. PMID: 20445623

7

AVISPA: a web tool for the prediction and analysis of alternative splicing.

Barash Y, Vaquero-Garcia J, González-Vallinas J, Xiong HY, Gao W, Lee LJ, Frey BJ. Barash Y, et al. Genome Biol. 2013;14(10):R114. doi: 10.1186/gb-2013-14-10-r114. Genome Biol. 2013. PMID: 24156756 Free PMC article.

8

In silico to in vivo splicing analysis using splicing code models.

Gazzara MR, Vaquero-Garcia J, Lynch KW, Barash Y. Gazzara MR, et al. Among authors: barash y. Methods. 2014 May 1;67(1):3-12. doi: 10.1016/j.ymeth.2013.11.006. Epub 2013 Dec 7. Methods. 2014. PMID: 24321485 Free PMC article.

9

Splicing code modeling.

Barash Y, Vaquero-Garcia J. Barash Y, et al. Adv Exp Med Biol. 2014;825:451-66. doi: 10.1007/978-1-4939-1221-6_13. Adv Exp Med Biol. 2014. PMID: 25201114 Review.

10

Widespread JNK-dependent alternative splicing induces a positive feedback loop through CELF2-mediated regulation of MKK7 during T-cell activation.

Martinez NM, Agosto L, Qiu J, Mallory MJ, Gazzara MR, Barash Y, Fu XD, Lynch KW. Martinez NM, et al. Among authors: barash y. Genes Dev. 2015 Oct 1;29(19):2054-66. doi: 10.1101/gad.267245.115. Genes Dev. 2015. PMID: 26443849 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

151 results

Search Page