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Genomic transcription factor binding site selection is edited by the chromatin remodeling factor CHD4.
Saotome M, Poduval DB, Grimm SA, Nagornyuk A, Gunarathna S, Shimbo T, Wade PA, Takaku M. Saotome M, et al. Among authors: wade pa. Res Sq [Preprint]. 2023 Mar 15:rs.3.rs-2587918. doi: 10.21203/rs.3.rs-2587918/v1. Res Sq. 2023. Update in: Nucleic Acids Res. 2024 Apr 24;52(7):3607-3622. doi: 10.1093/nar/gkae025. PMID: 36993416 Free PMC article. Updated. Preprint.
MBD3 localizes at promoters, gene bodies and enhancers of active genes.
Shimbo T, Du Y, Grimm SA, Dhasarathy A, Mav D, Shah RR, Shi H, Wade PA. Shimbo T, et al. Among authors: wade pa. PLoS Genet. 2013;9(12):e1004028. doi: 10.1371/journal.pgen.1004028. Epub 2013 Dec 26. PLoS Genet. 2013. PMID: 24385926 Free PMC article.
Inhibition of histone binding by supramolecular hosts.
Allen HF, Daze KD, Shimbo T, Lai A, Musselman CA, Sims JK, Wade PA, Hof F, Kutateladze TG. Allen HF, et al. Among authors: wade pa. Biochem J. 2014 May 1;459(3):505-12. doi: 10.1042/BJ20140145. Biochem J. 2014. PMID: 24576085 Free PMC article.
Genome-wide binding of MBD2 reveals strong preference for highly methylated loci.
Menafra R, Brinkman AB, Matarese F, Franci G, Bartels SJ, Nguyen L, Shimbo T, Wade PA, Hubner NC, Stunnenberg HG. Menafra R, et al. Among authors: wade pa. PLoS One. 2014 Jun 13;9(6):e99603. doi: 10.1371/journal.pone.0099603. eCollection 2014. PLoS One. 2014. PMID: 24927503 Free PMC article.
GATA3 in Breast Cancer: Tumor Suppressor or Oncogene?
Takaku M, Grimm SA, Wade PA. Takaku M, et al. Among authors: wade pa. Gene Expr. 2015;16(4):163-8. doi: 10.3727/105221615X14399878166113. Gene Expr. 2015. PMID: 26637396 Free PMC article. Review.
197 results