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5-hydroxymethylcytosine profiling of cell-free DNA identifies bivalent genes that are prognostic of survival in high-risk neuroblastoma.
Chennakesavalu M, Moore K, Chaves G, Veeravalli S, TerHaar R, Wu T, Lyu R, Chlenski A, He C, Piunti A, Applebaum MA. Chennakesavalu M, et al. Among authors: he c. bioRxiv [Preprint]. 2023 Apr 30:2023.04.27.538309. doi: 10.1101/2023.04.27.538309. bioRxiv. 2023. Update in: JCO Precis Oncol. 2024 Jan;8:e2300297. doi: 10.1200/PO.23.00297. PMID: 37163024 Free PMC article. Updated. Preprint.
Adrenergic and mesenchymal signatures are identifiable in cell-free DNA and correlate with metastatic disease burden in children with neuroblastoma.
Vayani OR, Kaufman ME, Moore K, Chennakesavalu M, TerHaar R, Chaves G, Chlenski A, He C, Cohn SL, Applebaum MA. Vayani OR, et al. Among authors: he c. bioRxiv [Preprint]. 2023 Sep 1:2023.08.30.554943. doi: 10.1101/2023.08.30.554943. bioRxiv. 2023. Update in: Pediatr Blood Cancer. 2024 Jan;71(1):e30735. doi: 10.1002/pbc.30735. PMID: 37693610 Free PMC article. Updated. Preprint.
Machine learning identifies cell-free DNA 5-hydroxymethylation biomarkers that detect occult colorectal cancer in PLCO Screening Trial subjects.
West-Szymanski DC, Zhang Z, Cui XL, Kowitwanich K, Gao L, Deng Z, Dougherty U, Williams C, Merkle S, Moore M, He C, Bissonnette M, Zhang W. West-Szymanski DC, et al. Among authors: he c. bioRxiv [Preprint]. 2024 Feb 26:2024.02.25.581955. doi: 10.1101/2024.02.25.581955. bioRxiv. 2024. PMID: 38464122 Free PMC article. Preprint.
m 6 A mRNA Methylation in Brown Adipose Tissue Regulates Systemic Insulin Sensitivity via an Inter-Organ Prostaglandin Signaling Axis.
Xiao L, De Jesus DF, Ju CW, Wei JB, Hu J, DiStefano-Forti A, Tsuji T, Cero C, Männistö V, Manninen SM, Wei S, Ijaduola O, Blüher M, Cypess AM, Pihlajamäki J, Tseng YH, He C, Kulkarni RN. Xiao L, et al. Among authors: he c. bioRxiv [Preprint]. 2023 May 26:2023.05.26.542169. doi: 10.1101/2023.05.26.542169. bioRxiv. 2023. PMID: 37292780 Free PMC article. Preprint.
Redox Regulation of m 6 A Methyltransferase METTL3 in Human β-cells Controls the Innate Immune Response in Type 1 Diabetes.
De Jesus DF, Zhang Z, Brown NK, Li X, Gaffrey MJ, Kahraman S, Wei J, Hu J, Basile G, Xiao L, Rana TM, Mathews C, Powers AC, Atkinson MA, Eizirik DL, Dhe-Paganon S, Parent AV, Qian WJ, He C, Kulkarni RN. De Jesus DF, et al. Among authors: he c. bioRxiv [Preprint]. 2023 Feb 16:2023.02.16.528701. doi: 10.1101/2023.02.16.528701. bioRxiv. 2023. Update in: Nat Cell Biol. 2024 Mar;26(3):421-437. doi: 10.1038/s41556-024-01368-0. PMID: 36824909 Free PMC article. Updated. Preprint.
Epitranscriptomic Reader YTHDF2 Regulates SEK1( MAP2K4 )-JNK-cJUN Inflammatory Signaling in Astrocytes during Neurotoxic Stress.
Malovic E, Ealy A, Hsu PJ, Sarkar S, Miller C, Rokad D, Goeser C, Hartman AK, Zhu A, Palanisamy B, Zenitsky G, Jin H, Anantharam V, Kanthasamy A, He C, Kanthasamy AG. Malovic E, et al. Among authors: he c. bioRxiv [Preprint]. 2024 Jan 26:2024.01.26.577106. doi: 10.1101/2024.01.26.577106. bioRxiv. 2024. PMID: 38328119 Free PMC article. Preprint.
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