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Mitotic chromatin marking governs asymmetric segregation of DNA damage.
bioRxiv [Preprint]. 2023 Sep 5:2023.09.04.556166. doi: 10.1101/2023.09.04.556166.
bioRxiv. 2023.
PMID: 37732208
Free PMC article.
Preprint.
Ketolysis drives CD8+ T cell effector function through effects on histone acetylation.
Luda KM, Longo J, Kitchen-Goosen SM, Duimstra LR, Ma EH, Watson MJ, Oswald BM, Fu Z, Madaj Z, Kupai A, Dickson BM, DeCamp LM, Dahabieh MS, Compton SE, Teis R, Kaymak I, Lau KH, Kelly DP, Puchalska P, Williams KS, Krawczyk CM, Lévesque D, Boisvert FM, Sheldon RD, Rothbart SB, Crawford PA, Jones RG.
Luda KM, et al. Among authors: kupai a.
Immunity. 2023 Sep 12;56(9):2021-2035.e8. doi: 10.1016/j.immuni.2023.07.002. Epub 2023 Jul 28.
Immunity. 2023.
PMID: 37516105
Free article.
Item in Clipboard
Streamlined quantitative analysis of histone modification abundance at nucleosome-scale resolution with siQ-ChIP version 2.0.
Dickson BM, Kupai A, Vaughan RM, Rothbart SB.
Dickson BM, et al. Among authors: kupai a.
Sci Rep. 2023 May 9;13(1):7508. doi: 10.1038/s41598-023-34430-2.
Sci Rep. 2023.
PMID: 37160995
Free PMC article.
Item in Clipboard
Analysis of histone antibody specificity directly in sequencing data using siQ-ChIP.
Kupai A, Vaughan RM, Rothbart SB, Dickson BM.
Kupai A, et al.
bioRxiv [Preprint]. 2023 Mar 8:2023.03.08.531745. doi: 10.1101/2023.03.08.531745.
bioRxiv. 2023.
PMID: 36945621
Free PMC article.
Preprint.
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Phosphorylation of serine residues S252, S268/S269, and S879 in p120 catenin activates migration of presomitic mesoderm in gastrulating zebrafish embryos.
Kupai A, Nakahara H, Voss KM, Hirano MS, Rodriguez A, Lackey DL, Murayama JF, Mathieson CJ, Shan B, Horton EC, Curtis GH, Huang J, Hille MB.
Kupai A, et al.
Dev Dyn. 2022 Dec;251(12):1952-1967. doi: 10.1002/dvdy.508. Epub 2022 Sep 19.
Dev Dyn. 2022.
PMID: 35706088
Free article.
Item in Clipboard
Chromatin Regulation through Ubiquitin and Ubiquitin-like Histone Modifications.
Vaughan RM, Kupai A, Rothbart SB.
Vaughan RM, et al. Among authors: kupai a.
Trends Biochem Sci. 2021 Apr;46(4):258-269. doi: 10.1016/j.tibs.2020.11.005. Epub 2020 Dec 9.
Trends Biochem Sci. 2021.
PMID: 33308996
Free PMC article.
Review.
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The histone and non-histone methyllysine reader activities of the UHRF1 tandem Tudor domain are dispensable for the propagation of aberrant DNA methylation patterning in cancer cells.
Vaughan RM, Kupai A, Foley CA, Sagum CA, Tibben BM, Eden HE, Tiedemann RL, Berryhill CA, Patel V, Shaw KM, Krajewski K, Strahl BD, Bedford MT, Frye SV, Dickson BM, Rothbart SB.
Vaughan RM, et al. Among authors: kupai a.
Epigenetics Chromatin. 2020 Oct 23;13(1):44. doi: 10.1186/s13072-020-00366-4.
Epigenetics Chromatin. 2020.
PMID: 33097091
Free PMC article.
Item in Clipboard
A Degenerate Peptide Library Approach to Reveal Sequence Determinants of Methyllysine-Driven Protein Interactions.
Kupai A, Vaughan RM, Dickson BM, Rothbart SB.
Kupai A, et al.
Front Cell Dev Biol. 2020 Apr 9;8:241. doi: 10.3389/fcell.2020.00241. eCollection 2020.
Front Cell Dev Biol. 2020.
PMID: 32328492
Free PMC article.
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