Williams LD - Search Results

1

Common evolutionary origins of the bacterial glycyl tRNA synthetase and alanyl tRNA synthetase.

Alvarez-Carreño C, Arciniega M, Ribas de Pouplana L, Petrov AS, Hernández-González A, Dimas-Torres JU, Valencia-Sánchez MI, Williams LD, Torres-Larios A. Alvarez-Carreño C, et al. Among authors: williams ld. Protein Sci. 2023 Nov 27;33(3):e4844. doi: 10.1002/pro.4844. Online ahead of print. Protein Sci. 2023. PMID: 38009704

2

Fold Evolution before LUCA: Common Ancestry of SH3 Domains and OB Domains.

Alvarez-Carreño C, Penev PI, Petrov AS, Williams LD. Alvarez-Carreño C, et al. Among authors: williams ld. Mol Biol Evol. 2021 Oct 27;38(11):5134-5143. doi: 10.1093/molbev/msab240. Mol Biol Evol. 2021. PMID: 34383917 Free PMC article.

3

Creative destruction: New protein folds from old.

Alvarez-Carreño C, Gupta RJ, Petrov AS, Williams LD. Alvarez-Carreño C, et al. Among authors: williams ld. Proc Natl Acad Sci U S A. 2022 Dec 27;119(52):e2207897119. doi: 10.1073/pnas.2207897119. Epub 2022 Dec 19. Proc Natl Acad Sci U S A. 2022. PMID: 36534803 Free PMC article.

4

The ancient heart of the ribosomal large subunit: a response to Caetano-Anolles.

Petrov AS, Williams LD. Petrov AS, et al. Among authors: williams ld. J Mol Evol. 2015 Apr;80(3-4):166-70. doi: 10.1007/s00239-015-9678-8. Epub 2015 Apr 16. J Mol Evol. 2015. PMID: 25877522

5

Root of the Tree: The Significance, Evolution, and Origins of the Ribosome.

Bowman JC, Petrov AS, Frenkel-Pinter M, Penev PI, Williams LD. Bowman JC, et al. Among authors: williams ld. Chem Rev. 2020 Jun 10;120(11):4848-4878. doi: 10.1021/acs.chemrev.9b00742. Epub 2020 May 6. Chem Rev. 2020. PMID: 32374986 Review.

6

TwinCons: Conservation score for uncovering deep sequence similarity and divergence.

Penev PI, Alvarez-Carreño C, Smith E, Petrov AS, Williams LD. Penev PI, et al. Among authors: williams ld. PLoS Comput Biol. 2021 Oct 29;17(10):e1009541. doi: 10.1371/journal.pcbi.1009541. eCollection 2021 Oct. PLoS Comput Biol. 2021. PMID: 34714829 Free PMC article.

7

Frozen in Time: The History of Proteins.

Kovacs NA, Petrov AS, Lanier KA, Williams LD. Kovacs NA, et al. Among authors: williams ld. Mol Biol Evol. 2017 May 1;34(5):1252-1260. doi: 10.1093/molbev/msx086. Mol Biol Evol. 2017. PMID: 28201543 Free PMC article.

8

Bidentate RNA-magnesium clamps: on the origin of the special role of magnesium in RNA folding.

Petrov AS, Bowman JC, Harvey SC, Williams LD. Petrov AS, et al. Among authors: williams ld. RNA. 2011 Feb;17(2):291-7. doi: 10.1261/rna.2390311. Epub 2010 Dec 20. RNA. 2011. PMID: 21173199 Free PMC article.

9

Imprint of Ancient Evolution on rRNA Folding.

Lanier KA, Athavale SS, Petrov AS, Wartell R, Williams LD. Lanier KA, et al. Among authors: williams ld. Biochemistry. 2016 Aug 23;55(33):4603-13. doi: 10.1021/acs.biochem.6b00168. Epub 2016 Aug 10. Biochemistry. 2016. PMID: 27428664

10

The Central Symbiosis of Molecular Biology: Molecules in Mutualism.

Lanier KA, Petrov AS, Williams LD. Lanier KA, et al. Among authors: williams ld. J Mol Evol. 2017 Aug;85(1-2):8-13. doi: 10.1007/s00239-017-9804-x. Epub 2017 Aug 7. J Mol Evol. 2017. PMID: 28785970 Free PMC article. Review.

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