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Systematic Profiling of Short Tandem Repeats in the Cattle Genome.
Xu L, Haasl RJ, Sun J, Zhou Y, Bickhart DM, Li J, Song J, Sonstegard TS, Van Tassell CP, Lewin HA, Liu GE. Xu L, et al. Among authors: liu ge. Genome Biol Evol. 2017 Jan 1;9(1):20-31. doi: 10.1093/gbe/evw256. Genome Biol Evol. 2017. PMID: 28172841 Free PMC article.
Single-molecule sequencing and chromatin conformation capture enable de novo reference assembly of the domestic goat genome.
Bickhart DM, Rosen BD, Koren S, Sayre BL, Hastie AR, Chan S, Lee J, Lam ET, Liachko I, Sullivan ST, Burton JN, Huson HJ, Nystrom JC, Kelley CM, Hutchison JL, Zhou Y, Sun J, Crisà A, Ponce de León FA, Schwartz JC, Hammond JA, Waldbieser GC, Schroeder SG, Liu GE, Dunham MJ, Shendure J, Sonstegard TS, Phillippy AM, Van Tassell CP, Smith TP. Bickhart DM, et al. Among authors: liu ge. Nat Genet. 2017 Apr;49(4):643-650. doi: 10.1038/ng.3802. Epub 2017 Mar 6. Nat Genet. 2017. PMID: 28263316 Free PMC article.
A compendium of genetic regulatory effects across pig tissues.
Teng J, Gao Y, Yin H, Bai Z, Liu S, Zeng H; PigGTEx Consortium; Bai L, Cai Z, Zhao B, Li X, Xu Z, Lin Q, Pan Z, Yang W, Yu X, Guan D, Hou Y, Keel BN, Rohrer GA, Lindholm-Perry AK, Oliver WT, Ballester M, Crespo-Piazuelo D, Quintanilla R, Canela-Xandri O, Rawlik K, Xia C, Yao Y, Zhao Q, Yao W, Yang L, Li H, Zhang H, Liao W, Chen T, Karlskov-Mortensen P, Fredholm M, Amills M, Clop A, Giuffra E, Wu J, Cai X, Diao S, Pan X, Wei C, Li J, Cheng H, Wang S, Su G, Sahana G, Lund MS, Dekkers JCM, Kramer L, Tuggle CK, Corbett R, Groenen MAM, Madsen O, Gòdia M, Rocha D, Charles M, Li CJ, Pausch H, Hu X, Frantz L, Luo Y, Lin L, Zhou Z, Zhang Z, Chen Z, Cui L, Xiang R, Shen X, Li P, Huang R, Tang G, Li M, Zhao Y, Yi G, Tang Z, Jiang J, Zhao F, Yuan X, Liu X, Chen Y, Xu X, Zhao S, Zhao P, Haley C, Zhou H, Wang Q, Pan Y, Ding X, Ma L, Li J, Navarro P, Zhang Q, Li B, Tenesa A, Li K, Liu GE, Zhang Z, Fang L. Teng J, et al. Among authors: liu x, liu s, liu ge. Nat Genet. 2024 Jan;56(1):112-123. doi: 10.1038/s41588-023-01585-7. Epub 2024 Jan 4. Nat Genet. 2024. PMID: 38177344 Free PMC article.
Mapping and functional characterization of structural variation in 1060 pig genomes.
Yang L, Yin H, Bai L, Yao W, Tao T, Zhao Q, Gao Y, Teng J, Xu Z, Lin Q, Diao S, Pan Z, Guan D, Li B, Zhou H, Zhou Z, Zhao F, Wang Q, Pan Y, Zhang Z, Li K, Fang L, Liu GE. Yang L, et al. Among authors: liu ge. Genome Biol. 2024 May 7;25(1):116. doi: 10.1186/s13059-024-03253-3. Genome Biol. 2024. PMID: 38715020 Free PMC article.
Mining Unknown Porcine Protein Isoforms by Tissue-based Map of Proteome Enhances Pig Genome Annotation.
Zhao P, Zheng X, Yu Y, Hou Z, Diao C, Wang H, Kang H, Ning C, Li J, Feng W, Wang W, Liu GE, Li B, Smith J, Chamba Y, Liu JF. Zhao P, et al. Among authors: liu jf, liu ge. Genomics Proteomics Bioinformatics. 2021 Oct;19(5):772-786. doi: 10.1016/j.gpb.2021.02.002. Epub 2021 Feb 23. Genomics Proteomics Bioinformatics. 2021. PMID: 33631433 Free PMC article.
A multi-tissue atlas of regulatory variants in cattle.
Liu S, Gao Y, Canela-Xandri O, Wang S, Yu Y, Cai W, Li B, Xiang R, Chamberlain AJ, Pairo-Castineira E, D'Mellow K, Rawlik K, Xia C, Yao Y, Navarro P, Rocha D, Li X, Yan Z, Li C, Rosen BD, Van Tassell CP, Vanraden PM, Zhang S, Ma L, Cole JB, Liu GE, Tenesa A, Fang L. Liu S, et al. Among authors: liu ge. Nat Genet. 2022 Sep;54(9):1438-1447. doi: 10.1038/s41588-022-01153-5. Epub 2022 Aug 11. Nat Genet. 2022. PMID: 35953587 Free PMC article.
566 results