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Mime-seq 2.0: a method to sequence microRNAs from specific mouse cell types.
Mandlbauer A, Sun Q, Popitsch N, Schwickert T, Spanova M, Wang J, Ameres SL, Busslinger M, Cochella L. Mandlbauer A, et al. Among authors: ameres sl. EMBO J. 2024 Apr 30. doi: 10.1038/s44318-024-00102-8. Online ahead of print. EMBO J. 2024. PMID: 38689024 Free article.
Cell-type specific sequencing of microRNAs from complex animal tissues.
Alberti C, Manzenreither RA, Sowemimo I, Burkard TR, Wang J, Mahofsky K, Ameres SL, Cochella L. Alberti C, et al. Among authors: ameres sl. Nat Methods. 2018 Apr;15(4):283-289. doi: 10.1038/nmeth.4610. Epub 2018 Feb 26. Nat Methods. 2018. PMID: 29481550 Free PMC article.
Multiplexed detection of SARS-CoV-2 and other respiratory infections in high throughput by SARSeq.
Yelagandula R, Bykov A, Vogt A, Heinen R, Özkan E, Strobl MM, Baar JC, Uzunova K, Hajdusits B, Kordic D, Suljic E, Kurtovic-Kozaric A, Izetbegovic S, Schaeffer J, Hufnagl P, Zoufaly A, Seitz T; VCDI; Födinger M, Allerberger F, Stark A, Cochella L, Elling U. Yelagandula R, et al. Nat Commun. 2021 May 25;12(1):3132. doi: 10.1038/s41467-021-22664-5. Nat Commun. 2021. PMID: 34035246 Free PMC article.
Transcriptome-Wide Profiling of RNA Stability.
Fasching N, Petržílek J, Popitsch N, Herzog VA, Ameres SL. Fasching N, et al. Among authors: ameres sl. Methods Mol Biol. 2022;2404:311-330. doi: 10.1007/978-1-0716-1851-6_17. Methods Mol Biol. 2022. PMID: 34694617
Hijacking of transcriptional condensates by endogenous retroviruses.
Asimi V, Sampath Kumar A, Niskanen H, Riemenschneider C, Hetzel S, Naderi J, Fasching N, Popitsch N, Du M, Kretzmer H, Smith ZD, Weigert R, Walther M, Mamde S, Meierhofer D, Wittler L, Buschow R, Timmermann B, Cisse II, Ameres SL, Meissner A, Hnisz D. Asimi V, et al. Among authors: ameres sl. Nat Genet. 2022 Aug;54(8):1238-1247. doi: 10.1038/s41588-022-01132-w. Epub 2022 Jul 21. Nat Genet. 2022. PMID: 35864192 Free PMC article.
Diversifying microRNA sequence and function.
Ameres SL, Zamore PD. Ameres SL, et al. Nat Rev Mol Cell Biol. 2013 Aug;14(8):475-88. doi: 10.1038/nrm3611. Epub 2013 Jun 26. Nat Rev Mol Cell Biol. 2013. PMID: 23800994 Review.
Thiol-linked alkylation of RNA to assess expression dynamics.
Herzog VA, Reichholf B, Neumann T, Rescheneder P, Bhat P, Burkard TR, Wlotzka W, von Haeseler A, Zuber J, Ameres SL. Herzog VA, et al. Among authors: ameres sl. Nat Methods. 2017 Dec;14(12):1198-1204. doi: 10.1038/nmeth.4435. Epub 2017 Sep 25. Nat Methods. 2017. PMID: 28945705 Free PMC article.
39 results