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Large-scale genomic analysis reveals the genetic cost of chicken domestication.
Wang MS, Zhang JJ, Guo X, Li M, Meyer R, Ashari H, Zheng ZQ, Wang S, Peng MS, Jiang Y, Thakur M, Suwannapoom C, Esmailizadeh A, Hirimuthugoda NY, Zein MSA, Kusza S, Kharrati-Koopaee H, Zeng L, Wang YM, Yin TT, Yang MM, Li ML, Lu XM, Lasagna E, Ceccobelli S, Gunwardana HGTN, Senasig TM, Feng SH, Zhang H, Bhuiyan AKFH, Khan MS, Silva GLLP, Thuy LT, Mwai OA, Ibrahim MNM, Zhang G, Qu KX, Hanotte O, Shapiro B, Bosse M, Wu DD, Han JL, Zhang YP. Wang MS, et al. BMC Biol. 2021 Jun 16;19(1):118. doi: 10.1186/s12915-021-01052-x. BMC Biol. 2021. PMID: 34130700 Free PMC article.
RESULTS: We analyzed a dataset comprising over 800 whole genomes from both indigenous chickens and wild jungle fowls. We show that despite having a higher genetic diversity than their wild counterparts (average pi, 0.00326 vs. 0.00316), the red jungle fowls, the pre …
RESULTS: We analyzed a dataset comprising over 800 whole genomes from both indigenous chickens and wild jungle fowls. We show that de …
Polymorphism of avian leukosis virus subgroup E loci showing selective footprints in chicken.
Chen W, Qu H, Li C, Luo C, Wang J, Yang C, Shu D. Chen W, et al. Biochem Genet. 2014 Dec;52(11-12):524-37. doi: 10.1007/s10528-014-9664-7. Epub 2014 Jul 10. Biochem Genet. 2014. PMID: 25007752
To investigate the genetic consequences of chicken domestication, we analyzed 18 ALVE loci in red jungle fowls, layers, broilers, and Chinese indigenous chickens. None of the ALVE loci tested were found in red jungle fowls, but 12 were present in domestic chickens. …
To investigate the genetic consequences of chicken domestication, we analyzed 18 ALVE loci in red jungle fowls, layers, broilers, and …
Genome diversity of Chinese indigenous chicken and the selective signatures in Chinese gamecock chicken.
Luo W, Luo C, Wang M, Guo L, Chen X, Li Z, Zheng M, Folaniyi BS, Luo W, Shu D, Song L, Fang M, Zhang X, Qu H, Nie Q. Luo W, et al. Sci Rep. 2020 Sep 3;10(1):14532. doi: 10.1038/s41598-020-71421-z. Sci Rep. 2020. PMID: 32883984 Free PMC article.
In this study, we sequenced 126 chicken genomes from 19 populations, including four commercial chicken breeds that are commonly farmed in China, 13 nationwide Chinese typical indigenous chicken breeds (including two Chinese gamecock breeds), one red jungle fowl from Guangx …
In this study, we sequenced 126 chicken genomes from 19 populations, including four commercial chicken breeds that are commonly farmed in Ch …
Skewed allele frequencies of an Mx gene mutation with potential resistance to avian influenza virus in different chicken populations.
Li XY, Qu LJ, Yao JF, Yang N. Li XY, et al. Poult Sci. 2006 Jul;85(7):1327-9. doi: 10.1093/ps/85.7.1327. Poult Sci. 2006. PMID: 16830876 Free article.
In the current study, 15 Chinese native chicken breeds, 4 highly selected commercial lines, and the Red Jungle Fowl were selected to detect allele frequencies of the Mx mutation. ...
In the current study, 15 Chinese native chicken breeds, 4 highly selected commercial lines, and the Red Jungle Fowl were selected to …
[Genetic diversity in Tibetan chicken].
Du ZQ, Qu LJ, Li XY, Hu XX, Huang YH, Li N, Yang N. Du ZQ, et al. Yi Chuan. 2004 Mar;26(2):167-71. Yi Chuan. 2004. PMID: 15639981 Chinese.
Morphological traits and living habit of Tibetan chicken, which is an aboriginal chicken breed on plateau with its own characteristic populational genetic features, are in great common with the Red Jungle Fowl, the assumed ancestry of domestic chicken. To fully exploit thi …
Morphological traits and living habit of Tibetan chicken, which is an aboriginal chicken breed on plateau with its own characteristic popula …