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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2002 6
2003 6
2004 8
2005 8
2006 12
2007 12
2008 7
2009 15
2010 17
2011 14
2012 15
2013 14
2014 20
2015 21
2016 23
2017 27
2018 21
2019 22
2020 14
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Search Results

260 results
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Page 1
Promoting transparency and reproducibility in enhanced molecular simulations.
PLUMED consortium. PLUMED consortium. Nat Methods. 2019 Aug;16(8):670-673. doi: 10.1038/s41592-019-0506-8. Nat Methods. 2019. PMID: 31363226 Free article. No abstract available.
Local-to-global signal transduction at the core of a Mn2+ sensing riboswitch.
Suddala KC, Price IR, Dandpat SS, Janeček M, Kührová P, Šponer J, Banáš P, Ke A, Walter NG. Suddala KC, et al. Among authors: sponer j. Nat Commun. 2019 Sep 20;10(1):4304. doi: 10.1038/s41467-019-12230-5. Nat Commun. 2019. PMID: 31541094 Free PMC article.
Molecular basis for AU-rich element recognition and dimerization by the HuR C-terminal RRM.
Ripin N, Boudet J, Duszczyk MM, Hinniger A, Faller M, Krepl M, Gadi A, Schneider RJ, Šponer J, Meisner-Kober NC, Allain FH. Ripin N, et al. Among authors: sponer j. Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):2935-2944. doi: 10.1073/pnas.1808696116. Epub 2019 Feb 4. Proc Natl Acad Sci U S A. 2019. PMID: 30718402 Free PMC article.
DNA Damage Changes Distribution Pattern and Levels of HP1 Protein Isoforms in the Nucleolus and Increases Phosphorylation of HP1β-Ser88.
Legartová S, Lochmanová G, Zdráhal Z, Kozubek S, Šponer J, Krepl M, Pokorná P, Bártová E. Legartová S, et al. Among authors: sponer j. Cells. 2019 Sep 17;8(9):1097. doi: 10.3390/cells8091097. Cells. 2019. PMID: 31533340 Free PMC article.
Four Ways to Oligonucleotides Without Phosphoimidazolides.
Šponer JE, Šponer J, Di Mauro E. Šponer JE, et al. Among authors: sponer j. J Mol Evol. 2016 Jan;82(1):5-10. doi: 10.1007/s00239-015-9709-5. Epub 2015 Oct 31. J Mol Evol. 2016. PMID: 26520151 Review.
RuvC uses dynamic probing of the Holliday junction to achieve sequence specificity and efficient resolution.
Górecka KM, Krepl M, Szlachcic A, Poznański J, Šponer J, Nowotny M. Górecka KM, et al. Among authors: sponer j. Nat Commun. 2019 Sep 10;10(1):4102. doi: 10.1038/s41467-019-11900-8. Nat Commun. 2019. PMID: 31506434 Free PMC article.
Rewarming the Primordial Soup: Revisitations and Rediscoveries in Prebiotic Chemistry.
Saladino R, Šponer JE, Šponer J, Di Mauro E. Saladino R, et al. Among authors: sponer j. Chembiochem. 2018 Jan 4;19(1):22-25. doi: 10.1002/cbic.201700534. Epub 2017 Nov 22. Chembiochem. 2018. PMID: 29164768 Free PMC article. Review.
Parallel G-triplexes and G-hairpins as potential transitory ensembles in the folding of parallel-stranded DNA G-Quadruplexes.
Stadlbauer P, Kührová P, Vicherek L, Banáš P, Otyepka M, Trantírek L, Šponer J. Stadlbauer P, et al. Among authors: sponer j. Nucleic Acids Res. 2019 Aug 22;47(14):7276-7293. doi: 10.1093/nar/gkz610. Nucleic Acids Res. 2019. PMID: 31318975 Free PMC article.
RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview.
Šponer J, Bussi G, Krepl M, Banáš P, Bottaro S, Cunha RA, Gil-Ley A, Pinamonti G, Poblete S, Jurečka P, Walter NG, Otyepka M. Šponer J, et al. Chem Rev. 2018 Apr 25;118(8):4177-4338. doi: 10.1021/acs.chemrev.7b00427. Epub 2018 Jan 3. Chem Rev. 2018. PMID: 29297679 Free PMC article. Review.
New evolutionary insights into the non-enzymatic origin of RNA oligomers.
Šponer JE, Šponer J, Mauro ED. Šponer JE, et al. Among authors: sponer j. Wiley Interdiscip Rev RNA. 2017 May;8(3). doi: 10.1002/wrna.1400. Epub 2016 Oct 26. Wiley Interdiscip Rev RNA. 2017. PMID: 27785893 Review.
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