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Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags.
Gorodkin J, Cirera S, Hedegaard J, Gilchrist MJ, Panitz F, Jørgensen C, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Rosenkilde C, Wang J, Li H, Li R, Liu B, Hu S, Dong W, Li W, Yu J, Wang J, Staefeldt HH, Wernersson R, Madsen LB, Thomsen B, Hornshøj H, Bujie Z, Wang X, Wang X, Bolund L, Brunak S, Yang H, Bendixen C, Fredholm M. Gorodkin J, et al. Among authors: nielsen bj. Genome Biol. 2007;8(4):R45. doi: 10.1186/gb-2007-8-4-r45. Genome Biol. 2007. PMID: 17407547 Free PMC article.
SNP mining porcine ESTs with MAVIANT, a novel tool for SNP evaluation and annotation.
Panitz F, Stengaard H, Hornshøj H, Gorodkin J, Hedegaard J, Cirera S, Thomsen B, Madsen LB, Høj A, Vingborg RK, Zahn B, Wang X, Wang X, Wernersson R, Jørgensen CB, Scheibye-Knudsen K, Arvin T, Lumholdt S, Sawera M, Green T, Nielsen BJ, Havgaard JH, Brunak S, Fredholm M, Bendixen C. Panitz F, et al. Among authors: nielsen bj. Bioinformatics. 2007 Jul 1;23(13):i387-91. doi: 10.1093/bioinformatics/btm192. Bioinformatics. 2007. PMID: 17646321