Duarte FM[au] - Search Results

Year	Number of Results
1986	1
2001	1
2009	1
2013	1
2014	1
2016	2
2018	3
2019	2
2020	4
2021	3
2022	3
2023	1

1

Epigenomic State Transitions Characterize Tumor Progression in Mouse Lung Adenocarcinoma.

LaFave LM, Kartha VK, Ma S, Meli K, Del Priore I, Lareau C, Naranjo S, Westcott PMK, Duarte FM, Sankar V, Chiang Z, Brack A, Law T, Hauck H, Okimoto A, Regev A, Buenrostro JD, Jacks T. LaFave LM, et al. Among authors: duarte fm. Cancer Cell. 2020 Aug 10;38(2):212-228.e13. doi: 10.1016/j.ccell.2020.06.006. Epub 2020 Jul 23. Cancer Cell. 2020. PMID: 32707078 Free PMC article.

2

Molecular mechanisms driving transcriptional stress responses.

Vihervaara A, Duarte FM, Lis JT. Vihervaara A, et al. Among authors: duarte fm. Nat Rev Genet. 2018 Jun;19(6):385-397. doi: 10.1038/s41576-018-0001-6. Nat Rev Genet. 2018. PMID: 29556092 Free PMC article. Review.

3

Functional inference of gene regulation using single-cell multi-omics.

Kartha VK, Duarte FM, Hu Y, Ma S, Chew JG, Lareau CA, Earl A, Burkett ZD, Kohlway AS, Lebofsky R, Buenrostro JD. Kartha VK, et al. Among authors: duarte fm. Cell Genom. 2022 Sep 14;2(9):100166. doi: 10.1016/j.xgen.2022.100166. Epub 2022 Aug 4. Cell Genom. 2022. PMID: 36204155 Free PMC article.

4

Deep learning-based enhancement of epigenomics data with AtacWorks.

Lal A, Chiang ZD, Yakovenko N, Duarte FM, Israeli J, Buenrostro JD. Lal A, et al. Among authors: duarte fm. Nat Commun. 2021 Mar 8;12(1):1507. doi: 10.1038/s41467-021-21765-5. Nat Commun. 2021. PMID: 33686069 Free PMC article.

5

Defining data-driven primary transcript annotations with primaryTranscriptAnnotation in R.

Anderson WD, Duarte FM, Civelek M, Guertin MJ. Anderson WD, et al. Among authors: duarte fm. Bioinformatics. 2020 May 1;36(9):2926-2928. doi: 10.1093/bioinformatics/btaa011. Bioinformatics. 2020. PMID: 31917388 Free PMC article.

6

Droplet-based combinatorial indexing for massive-scale single-cell chromatin accessibility.

Lareau CA, Duarte FM, Chew JG, Kartha VK, Burkett ZD, Kohlway AS, Pokholok D, Aryee MJ, Steemers FJ, Lebofsky R, Buenrostro JD. Lareau CA, et al. Among authors: duarte fm. Nat Biotechnol. 2019 Aug;37(8):916-924. doi: 10.1038/s41587-019-0147-6. Epub 2019 Jun 24. Nat Biotechnol. 2019. PMID: 31235917

7

Inference and effects of barcode multiplets in droplet-based single-cell assays.

Lareau CA, Ma S, Duarte FM, Buenrostro JD. Lareau CA, et al. Among authors: duarte fm. Nat Commun. 2020 Feb 13;11(1):866. doi: 10.1038/s41467-020-14667-5. Nat Commun. 2020. PMID: 32054859 Free PMC article.

8

The Drosophila BEAF insulator protein interacts with the polybromo subunit of the PBAP chromatin remodeling complex.

McKowen JK, Avva SVSP, Maharjan M, Duarte FM, Tome JM, Judd J, Wood JL, Negedu S, Dong Y, Lis JT, Hart CM. McKowen JK, et al. Among authors: duarte fm. G3 (Bethesda). 2022 Nov 4;12(11):jkac223. doi: 10.1093/g3journal/jkac223. G3 (Bethesda). 2022. PMID: 36029240 Free PMC article.

9

Pioneer-like factor GAF cooperates with PBAP (SWI/SNF) and NURF (ISWI) to regulate transcription.

Judd J, Duarte FM, Lis JT. Judd J, et al. Among authors: duarte fm. Genes Dev. 2021 Jan 1;35(1-2):147-156. doi: 10.1101/gad.341768.120. Epub 2020 Dec 10. Genes Dev. 2021. PMID: 33303640 Free PMC article.

10

Effect of polymer type on the properties of polypropylene composites with high loads of spent coffee grounds.

Marques M, Gonçalves LFFF, Martins CI, Vale M, Duarte FM. Marques M, et al. Among authors: duarte fm. Waste Manag. 2022 Oct 20;154:232-244. doi: 10.1016/j.wasman.2022.10.009. Online ahead of print. Waste Manag. 2022. PMID: 36274433

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