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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2009 1
2010 3
2011 3
2012 1
2013 1
2014 2
2016 3
2017 3
2018 1
2019 8
2020 6
2021 10
2022 6
2023 6
2024 7

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59 results

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Page 1
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation.
Thomas AM, Manghi P, Asnicar F, Pasolli E, Armanini F, Zolfo M, Beghini F, Manara S, Karcher N, Pozzi C, Gandini S, Serrano D, Tarallo S, Francavilla A, Gallo G, Trompetto M, Ferrero G, Mizutani S, Shiroma H, Shiba S, Shibata T, Yachida S, Yamada T, Wirbel J, Schrotz-King P, Ulrich CM, Brenner H, Arumugam M, Bork P, Zeller G, Cordero F, Dias-Neto E, Setubal JC, Tett A, Pardini B, Rescigno M, Waldron L, Naccarati A, Segata N. Thomas AM, et al. Among authors: setubal jc. Nat Med. 2019 Apr;25(4):667-678. doi: 10.1038/s41591-019-0405-7. Epub 2019 Apr 1. Nat Med. 2019. PMID: 30936548 Free PMC article.
Machine learning meets genome assembly.
Padovani de Souza K, Setubal JC, Ponce de Leon F de Carvalho AC, Oliveira G, Chateau A, Alves R. Padovani de Souza K, et al. Among authors: setubal jc. Brief Bioinform. 2019 Nov 27;20(6):2116-2129. doi: 10.1093/bib/bby072. Brief Bioinform. 2019. PMID: 30137230 Review.
Step-by-Step Bacterial Genome Comparison.
Carhuaricra-Huaman D, Setubal JC. Carhuaricra-Huaman D, et al. Among authors: setubal jc. Methods Mol Biol. 2024;2802:107-134. doi: 10.1007/978-1-0716-3838-5_5. Methods Mol Biol. 2024. PMID: 38819558
A Guide to Phylogenomic Inference.
Patané JSL, Martins J Jr, Setubal JC. Patané JSL, et al. Among authors: setubal jc. Methods Mol Biol. 2024;2802:267-345. doi: 10.1007/978-1-0716-3838-5_11. Methods Mol Biol. 2024. PMID: 38819564
Comparative Analyses of Bacteriophage Genomes.
Rossi FPN, Flores VS, Uceda-Campos G, Amgarten DE, Setubal JC, da Silva AM. Rossi FPN, et al. Among authors: setubal jc. Methods Mol Biol. 2024;2802:427-453. doi: 10.1007/978-1-0716-3838-5_14. Methods Mol Biol. 2024. PMID: 38819567
How to Obtain and Compare Metagenome-Assembled Genomes.
Sanchez FB, Sato Guima SE, Setubal JC. Sanchez FB, et al. Among authors: setubal jc. Methods Mol Biol. 2024;2802:135-163. doi: 10.1007/978-1-0716-3838-5_6. Methods Mol Biol. 2024. PMID: 38819559
COVID-19 induces more pronounced extracellular matrix deposition than other causes of ARDS.
de Souza Xavier Costa N, Ribeiro Júnior G, do Nascimento ECT, de Brito JM, Antonangelo L, Faria CS, Monteiro JS, Setubal JC, Pinho JRR, Pereira RV, Seelaender M, de Castro GS, Lima JDCC, de Almeida Monteiro RA, Duarte-Neto AN, Saldiva PHN, Ferraz da Silva LF, Dolhnikoff M, Mauad T. de Souza Xavier Costa N, et al. Among authors: setubal jc. Respir Res. 2023 Nov 14;24(1):281. doi: 10.1186/s12931-023-02555-7. Respir Res. 2023. PMID: 37964271 Free PMC article.
59 results