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2012 1
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Page 1
Computational modeling of RNA 3D structure based on experimental data.
Ponce-Salvatierra A, Astha, Merdas K, Nithin C, Ghosh P, Mukherjee S, Bujnicki JM. Ponce-Salvatierra A, et al. Among authors: nithin c. Biosci Rep. 2019 Feb 8;39(2):BSR20180430. doi: 10.1042/BSR20180430. Print 2019 Feb 28. Biosci Rep. 2019. PMID: 30670629 Free PMC article. Review.
Modeling of Three-Dimensional RNA Structures Using SimRNA.
Wirecki TK, Nithin C, Mukherjee S, Bujnicki JM, Boniecki MJ. Wirecki TK, et al. Among authors: nithin c. Methods Mol Biol. 2020;2165:103-125. doi: 10.1007/978-1-0716-0708-4_6. Methods Mol Biol. 2020. PMID: 32621221
Molecular architecture of protein-RNA recognition sites.
Barik A, C N, Pilla SP, Bahadur RP. Barik A, et al. Among authors: c n. J Biomol Struct Dyn. 2015;33(12):2738-51. doi: 10.1080/07391102.2015.1004652. Epub 2015 Feb 11. J Biomol Struct Dyn. 2015. PMID: 25562181
Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26.
Salerno-Kochan A, Horn A, Ghosh P, Nithin C, Kościelniak A, Meindl A, Strauss D, Krutyhołowa R, Rossbach O, Bujnicki JM, Gaik M, Medenbach J, Glatt S. Salerno-Kochan A, et al. Among authors: nithin c. Life Sci Alliance. 2022 May 5;5(8):e202201418. doi: 10.26508/lsa.202201418. Print 2022 Aug. Life Sci Alliance. 2022. PMID: 35512835 Free PMC article.
Constrained peptides mimic a viral suppressor of RNA silencing.
Kuepper A, McLoughlin NM, Neubacher S, Yeste-Vázquez A, Collado Camps E, Nithin C, Mukherjee S, Bethge L, Bujnicki JM, Brock R, Heinrichs S, Grossmann TN. Kuepper A, et al. Among authors: nithin c. Nucleic Acids Res. 2021 Dec 16;49(22):12622-12633. doi: 10.1093/nar/gkab1149. Nucleic Acids Res. 2021. PMID: 34871435 Free PMC article.
Computational Pipeline for Reference-Free Comparative Analysis of RNA 3D Structures Applied to SARS-CoV-2 UTR Models.
Gumna J, Antczak M, Adamiak RW, Bujnicki JM, Chen SJ, Ding F, Ghosh P, Li J, Mukherjee S, Nithin C, Pachulska-Wieczorek K, Ponce-Salvatierra A, Popenda M, Sarzynska J, Wirecki T, Zhang D, Zhang S, Zok T, Westhof E, Miao Z, Szachniuk M, Rybarczyk A. Gumna J, et al. Among authors: nithin c. Int J Mol Sci. 2022 Aug 25;23(17):9630. doi: 10.3390/ijms23179630. Int J Mol Sci. 2022. PMID: 36077037 Free PMC article.
23 results