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Year Number of Results
1995 1
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1998 1
1999 1
2001 2
2003 3
2004 3
2005 2
2006 6
2007 7
2008 3
2009 6
2010 6
2011 11
2012 4
2013 8
2014 10
2015 4
2016 3
2017 4
2018 4
2019 6
2020 7
2021 5
2022 6
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2024 4

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116 results

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Page 1
Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.
Siepel A, Bejerano G, Pedersen JS, Hinrichs AS, Hou M, Rosenbloom K, Clawson H, Spieth J, Hillier LW, Richards S, Weinstock GM, Wilson RK, Gibbs RA, Kent WJ, Miller W, Haussler D. Siepel A, et al. Genome Res. 2005 Aug;15(8):1034-50. doi: 10.1101/gr.3715005. Epub 2005 Jul 15. Genome Res. 2005. PMID: 16024819 Free PMC article.
Identification of constrained sequence elements across 239 primate genomes.
Kuderna LFK, Ulirsch JC, Rashid S, Ameen M, Sundaram L, Hickey G, Cox AJ, Gao H, Kumar A, Aguet F, Christmas MJ, Clawson H, Haeussler M, Janiak MC, Kuhlwilm M, Orkin JD, Bataillon T, Manu S, Valenzuela A, Bergman J, Rouselle M, Silva FE, Agueda L, Blanc J, Gut M, de Vries D, Goodhead I, Harris RA, Raveendran M, Jensen A, Chuma IS, Horvath JE, Hvilsom C, Juan D, Frandsen P, Schraiber JG, de Melo FR, Bertuol F, Byrne H, Sampaio I, Farias I, Valsecchi J, Messias M, da Silva MNF, Trivedi M, Rossi R, Hrbek T, Andriaholinirina N, Rabarivola CJ, Zaramody A, Jolly CJ, Phillips-Conroy J, Wilkerson G, Abee C, Simmons JH, Fernandez-Duque E, Kanthaswamy S, Shiferaw F, Wu D, Zhou L, Shao Y, Zhang G, Keyyu JD, Knauf S, Le MD, Lizano E, Merker S, Navarro A, Nadler T, Khor CC, Lee J, Tan P, Lim WK, Kitchener AC, Zinner D, Gut I, Melin AD, Guschanski K, Schierup MH, Beck RMD, Karakikes I, Wang KC, Umapathy G, Roos C, Boubli JP, Siepel A, Kundaje A, Paten B, Lindblad-Toh K, Rogers J, Marques Bonet T, Farh KK. Kuderna LFK, et al. Among authors: siepel a. Nature. 2024 Jan;625(7996):735-742. doi: 10.1038/s41586-023-06798-8. Epub 2023 Nov 29. Nature. 2024. PMID: 38030727 Free PMC article.
Cis-regulatory elements and human evolution.
Siepel A, Arbiza L. Siepel A, et al. Curr Opin Genet Dev. 2014 Dec;29:81-9. doi: 10.1016/j.gde.2014.08.011. Epub 2014 Sep 16. Curr Opin Genet Dev. 2014. PMID: 25218861 Free PMC article. Review.
A community-maintained standard library of population genetic models.
Adrion JR, Cole CB, Dukler N, Galloway JG, Gladstein AL, Gower G, Kyriazis CC, Ragsdale AP, Tsambos G, Baumdicker F, Carlson J, Cartwright RA, Durvasula A, Gronau I, Kim BY, McKenzie P, Messer PW, Noskova E, Ortega-Del Vecchyo D, Racimo F, Struck TJ, Gravel S, Gutenkunst RN, Lohmueller KE, Ralph PL, Schrider DR, Siepel A, Kelleher J, Kern AD. Adrion JR, et al. Among authors: siepel a. Elife. 2020 Jun 23;9:e54967. doi: 10.7554/eLife.54967. Elife. 2020. PMID: 32573438 Free PMC article.
Positive selection on apoptosis related genes.
da Fonseca RR, Kosiol C, Vinar T, Siepel A, Nielsen R. da Fonseca RR, et al. Among authors: siepel a. FEBS Lett. 2010 Feb 5;584(3):469-76. doi: 10.1016/j.febslet.2009.12.022. Epub 2009 Dec 22. FEBS Lett. 2010. PMID: 20026333 Free article. Review.
Clonal Lineage Tracing with Somatic Delivery of Recordable Barcodes Reveals Migration Histories of Metastatic Prostate Cancer.
Serio RN, Scheben A, Lu B, Gargiulo DV, Patruno L, Buckholtz CL, Chaffee RJ, Jibilian MC, Persaud SG, Staklinski SJ, Hassett R, Brault LM, Ramazzotti D, Barbieri CE, Siepel AC, Nowak DG. Serio RN, et al. Among authors: siepel ac. Cancer Discov. 2024 Oct 4;14(10):1990-2009. doi: 10.1158/2159-8290.CD-23-1332. Cancer Discov. 2024. PMID: 38969342
116 results