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Patch-seq: Past, Present, and Future.

Lipovsek M, Bardy C, Cadwell CR, Hadley K, Kobak D, Tripathy SJ. Lipovsek M, et al. Among authors: tripathy sj. J Neurosci. 2021 Feb 3;41(5):937-946. doi: 10.1523/JNEUROSCI.1653-20.2020. Epub 2021 Jan 11. J Neurosci. 2021. PMID: 33431632 Free PMC article. Review.

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Single-nucleus transcriptomics of the prefrontal cortex in major depressive disorder implicates oligodendrocyte precursor cells and excitatory neurons.

Nagy C, Maitra M, Tanti A, Suderman M, Théroux JF, Davoli MA, Perlman K, Yerko V, Wang YC, Tripathy SJ, Pavlidis P, Mechawar N, Ragoussis J, Turecki G. Nagy C, et al. Among authors: tripathy sj. Nat Neurosci. 2020 Jun;23(6):771-781. doi: 10.1038/s41593-020-0621-y. Epub 2020 Apr 27. Nat Neurosci. 2020. PMID: 32341540

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Symptom dimensions of major depression in a large community-based cohort.

Wainberg M, Zhukovsky P, Hill SL, Felsky D, Voineskos A, Kennedy S, Hawco C, Tripathy SJ. Wainberg M, et al. Among authors: tripathy sj. Psychol Med. 2021 May 19:1-8. doi: 10.1017/S0033291721001707. Online ahead of print. Psychol Med. 2021. PMID: 34008483

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Assessing Transcriptome Quality in Patch-Seq Datasets.

Tripathy SJ, Toker L, Bomkamp C, Mancarci BO, Belmadani M, Pavlidis P. Tripathy SJ, et al. Front Mol Neurosci. 2018 Oct 8;11:363. doi: 10.3389/fnmol.2018.00363. eCollection 2018. Front Mol Neurosci. 2018. PMID: 30349457 Free PMC article.

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Transcriptomic correlates of neuron electrophysiological diversity.

Tripathy SJ, Toker L, Li B, Crichlow CL, Tebaykin D, Mancarci BO, Pavlidis P. Tripathy SJ, et al. PLoS Comput Biol. 2017 Oct 25;13(10):e1005814. doi: 10.1371/journal.pcbi.1005814. eCollection 2017 Oct. PLoS Comput Biol. 2017. PMID: 29069078 Free PMC article.

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Diversity amongst human cortical pyramidal neurons revealed via their sag currents and frequency preferences.

Moradi Chameh H, Rich S, Wang L, Chen FD, Zhang L, Carlen PL, Tripathy SJ, Valiante TA. Moradi Chameh H, et al. Among authors: tripathy sj. Nat Commun. 2021 May 3;12(1):2497. doi: 10.1038/s41467-021-22741-9. Nat Commun. 2021. PMID: 33941783 Free PMC article.

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Estimating and Correcting for Off-Target Cellular Contamination in Brain Cell Type Specific RNA-Seq Data.

Sicherman J, Newton DF, Pavlidis P, Sibille E, Tripathy SJ. Sicherman J, et al. Among authors: tripathy sj. Front Mol Neurosci. 2021 Mar 3;14:637143. doi: 10.3389/fnmol.2021.637143. eCollection 2021. Front Mol Neurosci. 2021. PMID: 33746712 Free PMC article.

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Cannabis, schizophrenia genetic risk, and psychotic experiences: a cross-sectional study of 109,308 participants from the UK Biobank.

Wainberg M, Jacobs GR, di Forti M, Tripathy SJ. Wainberg M, et al. Among authors: tripathy sj. Transl Psychiatry. 2021 Apr 9;11(1):211. doi: 10.1038/s41398-021-01330-w. Transl Psychiatry. 2021. PMID: 33837184 Free PMC article.

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Association of accelerometer-derived sleep measures with lifetime psychiatric diagnoses: A cross-sectional study of 89,205 participants from the UK Biobank.

Wainberg M, Jones SE, Beaupre LM, Hill SL, Felsky D, Rivas MA, Lim ASP, Ollila HM, Tripathy SJ. Wainberg M, et al. Among authors: tripathy sj. PLoS Med. 2021 Oct 12;18(10):e1003782. doi: 10.1371/journal.pmed.1003782. eCollection 2021 Oct. PLoS Med. 2021. PMID: 34637446 Free PMC article.

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Clinical laboratory tests and five-year incidence of major depressive disorder: a prospective cohort study of 433,890 participants from the UK Biobank.

Wainberg M, Kloiber S, Diniz B, McIntyre RS, Felsky D, Tripathy SJ. Wainberg M, et al. Among authors: tripathy sj. Transl Psychiatry. 2021 Jul 7;11(1):380. doi: 10.1038/s41398-021-01505-5. Transl Psychiatry. 2021. PMID: 34234104 Free PMC article.

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