Similar articles for PMID: 23281769

Year	Number of Results
1993	1
2003	1
2004	2
2006	4
2007	1
2008	3
2009	1
2010	8
2011	10
2012	9
2013	7
2014	3
2015	7
2016	10
2017	8
2018	6
2019	4
2020	9
2021	4
2022	2
2024	0

1

ARG-based genome-wide analysis of cacao cultivars.

Utro F, Cornejo OE, Livingstone D, Motamayor JC, Parida L. Utro F, et al. BMC Bioinformatics. 2012;13 Suppl 19(Suppl 19):S17. doi: 10.1186/1471-2105-13-S19-S17. Epub 2012 Dec 19. BMC Bioinformatics. 2012. PMID: 23281769 Free PMC article.

2

Making a chocolate chip: development and evaluation of a 6K SNP array for Theobroma cacao.

Livingstone D, Royaert S, Stack C, Mockaitis K, May G, Farmer A, Saski C, Schnell R, Kuhn D, Motamayor JC. Livingstone D, et al. DNA Res. 2015 Aug;22(4):279-91. doi: 10.1093/dnares/dsv009. Epub 2015 Jun 11. DNA Res. 2015. PMID: 26070980 Free PMC article.

3

Genomic structural variants constrain and facilitate adaptation in natural populations of Theobroma cacao, the chocolate tree.

Hämälä T, Wafula EK, Guiltinan MJ, Ralph PE, dePamphilis CW, Tiffin P. Hämälä T, et al. Proc Natl Acad Sci U S A. 2021 Aug 31;118(35):e2102914118. doi: 10.1073/pnas.2102914118. Proc Natl Acad Sci U S A. 2021. PMID: 34408075 Free PMC article.

4

Genetic differentiation and intrinsic genomic features explain variation in recombination hotspots among cocoa tree populations.

Schwarzkopf EJ, Motamayor JC, Cornejo OE. Schwarzkopf EJ, et al. BMC Genomics. 2020 Apr 29;21(1):332. doi: 10.1186/s12864-020-6746-2. BMC Genomics. 2020. PMID: 32349675 Free PMC article.

5

Transposon fingerprinting using low coverage whole genome shotgun sequencing in cacao (Theobroma cacao L.) and related species.

Sveinsson S, Gill N, Kane NC, Cronk Q. Sveinsson S, et al. BMC Genomics. 2013 Jul 24;14:502. doi: 10.1186/1471-2164-14-502. BMC Genomics. 2013. PMID: 23883295 Free PMC article.

6

The cacao Criollo genome v2.0: an improved version of the genome for genetic and functional genomic studies.

Argout X, Martin G, Droc G, Fouet O, Labadie K, Rivals E, Aury JM, Lanaud C. Argout X, et al. BMC Genomics. 2017 Sep 15;18(1):730. doi: 10.1186/s12864-017-4120-9. BMC Genomics. 2017. PMID: 28915793 Free PMC article.

7

Estimating the ancestral recombinations graph (ARG) as compatible networks of SNP patterns.

Parida L, Melé M, Calafell F, Bertranpetit J; Genographic Consortium. Parida L, et al. J Comput Biol. 2008 Nov;15(9):1133-54. doi: 10.1089/cmb.2008.0065. J Comput Biol. 2008. PMID: 18844583

8

The genome of Theobroma cacao.

Argout X, Salse J, Aury JM, Guiltinan MJ, Droc G, Gouzy J, Allegre M, Chaparro C, Legavre T, Maximova SN, Abrouk M, Murat F, Fouet O, Poulain J, Ruiz M, Roguet Y, Rodier-Goud M, Barbosa-Neto JF, Sabot F, Kudrna D, Ammiraju JS, Schuster SC, Carlson JE, Sallet E, Schiex T, Dievart A, Kramer M, Gelley L, Shi Z, Bérard A, Viot C, Boccara M, Risterucci AM, Guignon V, Sabau X, Axtell MJ, Ma Z, Zhang Y, Brown S, Bourge M, Golser W, Song X, Clement D, Rivallan R, Tahi M, Akaza JM, Pitollat B, Gramacho K, D'Hont A, Brunel D, Infante D, Kebe I, Costet P, Wing R, McCombie WR, Guiderdoni E, Quetier F, Panaud O, Wincker P, Bocs S, Lanaud C. Argout X, et al. Nat Genet. 2011 Feb;43(2):101-8. doi: 10.1038/ng.736. Epub 2010 Dec 26. Nat Genet. 2011. PMID: 21186351

9

Identification of candidate genes involved in Witches' broom disease resistance in a segregating mapping population of Theobroma cacao L. in Brazil.

Royaert S, Jansen J, da Silva DV, de Jesus Branco SM, Livingstone DS 3rd, Mustiga G, Marelli JP, Araújo IS, Corrêa RX, Motamayor JC. Royaert S, et al. BMC Genomics. 2016 Feb 11;17:107. doi: 10.1186/s12864-016-2415-x. BMC Genomics. 2016. PMID: 26865216 Free PMC article.

10

Ancestral recombinations graph: a reconstructability perspective using random-graphs framework.

Parida L. Parida L. J Comput Biol. 2010 Oct;17(10):1345-70. doi: 10.1089/cmb.2009.0243. J Comput Biol. 2010. PMID: 20976875

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