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Natural copy number variation of tandemly repeated regulatory SNORD RNAs leads to individual phenotypic differences in mice.
Mol Ecol. 2021 Oct;30(19):4708-4722. doi: 10.1111/mec.16076. Epub 2021 Jul 28.
Mol Ecol. 2021.
PMID: 34252239
The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water.
Armisén D, Rajakumar R, Friedrich M, Benoit JB, Robertson HM, Panfilio KA, Ahn SJ, Poelchau MF, Chao H, Dinh H, Doddapaneni HV, Dugan S, Gibbs RA, Hughes DST, Han Y, Lee SL, Murali SC, Muzny DM, Qu J, Worley KC, Munoz-Torres M, Abouheif E, Bonneton F, Chen T, Chiang LM, Childers CP, Cridge AG, Crumière AJJ, Decaras A, Didion EM, Duncan EJ, Elpidina EN, Favé MJ, Finet C, Jacobs CGC, Cheatle Jarvela AM, Jennings EC, Jones JW, Lesoway MP, Lovegrove MR, Martynov A, Oppert B, Lillico-Ouachour A, Rajakumar A, Refki PN, Rosendale AJ, Santos ME, Toubiana W, van der Zee M, Vargas Jentzsch IM, Lowman AV, Viala S, Richards S, Khila A.
Armisén D, et al. Among authors: refki pn.
BMC Genomics. 2018 Nov 21;19(1):832. doi: 10.1186/s12864-018-5163-2.
BMC Genomics. 2018.
PMID: 30463532
Free PMC article.
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Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome.
Panfilio KA, Vargas Jentzsch IM, Benoit JB, Erezyilmaz D, Suzuki Y, Colella S, Robertson HM, Poelchau MF, Waterhouse RM, Ioannidis P, Weirauch MT, Hughes DST, Murali SC, Werren JH, Jacobs CGC, Duncan EJ, Armisén D, Vreede BMI, Baa-Puyoulet P, Berger CS, Chang CC, Chao H, Chen MM, Chen YT, Childers CP, Chipman AD, Cridge AG, Crumière AJJ, Dearden PK, Didion EM, Dinh H, Doddapaneni HV, Dolan A, Dugan S, Extavour CG, Febvay G, Friedrich M, Ginzburg N, Han Y, Heger P, Holmes CJ, Horn T, Hsiao YM, Jennings EC, Johnston JS, Jones TE, Jones JW, Khila A, Koelzer S, Kovacova V, Leask M, Lee SL, Lee CY, Lovegrove MR, Lu HL, Lu Y, Moore PJ, Munoz-Torres MC, Muzny DM, Palli SR, Parisot N, Pick L, Porter ML, Qu J, Refki PN, Richter R, Rivera-Pomar R, Rosendale AJ, Roth S, Sachs L, Santos ME, Seibert J, Sghaier E, Shukla JN, Stancliffe RJ, Tidswell O, Traverso L, van der Zee M, Viala S, Worley KC, Zdobnov EM, Gibbs RA, Richards S.
Panfilio KA, et al. Among authors: refki pn.
Genome Biol. 2019 Apr 2;20(1):64. doi: 10.1186/s13059-019-1660-0.
Genome Biol. 2019.
PMID: 30935422
Free PMC article.
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Integrating evo-devo with ecology for a better understanding of phenotypic evolution.
Santos ME, Berger CS, Refki PN, Khila A.
Santos ME, et al. Among authors: refki pn.
Brief Funct Genomics. 2015 Nov;14(6):384-95. doi: 10.1093/bfgp/elv003. Epub 2015 Mar 8.
Brief Funct Genomics. 2015.
PMID: 25750411
Free PMC article.
Review.
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Emergence of tissue sensitivity to Hox protein levels underlies the evolution of an adaptive morphological trait.
Refki PN, Armisén D, Crumière AJ, Viala S, Khila A.
Refki PN, et al.
Dev Biol. 2014 Aug 15;392(2):441-53. doi: 10.1016/j.ydbio.2014.05.021. Epub 2014 Jun 2.
Dev Biol. 2014.
PMID: 24886828
Free PMC article.
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Key patterning genes contribute to leg elongation in water striders.
Refki PN, Khila A.
Refki PN, et al.
Evodevo. 2015 Apr 28;6:14. doi: 10.1186/s13227-015-0015-5. eCollection 2015.
Evodevo. 2015.
PMID: 25973169
Free PMC article.
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Predator strike shapes antipredator phenotype through new genetic interactions in water striders.
Armisén D, Refki PN, Crumière AJ, Viala S, Toubiana W, Khila A.
Armisén D, et al. Among authors: refki pn.
Nat Commun. 2015 Sep 1;6:8153. doi: 10.1038/ncomms9153.
Nat Commun. 2015.
PMID: 26323602
Free PMC article.
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Unique features of a global human ectoparasite identified through sequencing of the bed bug genome.
Benoit JB, Adelman ZN, Reinhardt K, Dolan A, Poelchau M, Jennings EC, Szuter EM, Hagan RW, Gujar H, Shukla JN, Zhu F, Mohan M, Nelson DR, Rosendale AJ, Derst C, Resnik V, Wernig S, Menegazzi P, Wegener C, Peschel N, Hendershot JM, Blenau W, Predel R, Johnston PR, Ioannidis P, Waterhouse RM, Nauen R, Schorn C, Ott MC, Maiwald F, Johnston JS, Gondhalekar AD, Scharf ME, Peterson BF, Raje KR, Hottel BA, Armisén D, Crumière AJJ, Refki PN, Santos ME, Sghaier E, Viala S, Khila A, Ahn SJ, Childers C, Lee CY, Lin H, Hughes DST, Duncan EJ, Murali SC, Qu J, Dugan S, Lee SL, Chao H, Dinh H, Han Y, Doddapaneni H, Worley KC, Muzny DM, Wheeler D, Panfilio KA, Vargas Jentzsch IM, Vargo EL, Booth W, Friedrich M, Weirauch MT, Anderson MAE, Jones JW, Mittapalli O, Zhao C, Zhou JJ, Evans JD, Attardo GM, Robertson HM, Zdobnov EM, Ribeiro JMC, Gibbs RA, Werren JH, Palli SR, Schal C, Richards S.
Benoit JB, et al. Among authors: refki pn.
Nat Commun. 2016 Feb 2;7:10165. doi: 10.1038/ncomms10165.
Nat Commun. 2016.
PMID: 26836814
Free PMC article.
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