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Page 1
Self-Cloning CRISPR.
Arbab M, Sherwood RI. Arbab M, et al. Curr Protoc Stem Cell Biol. 2016 Aug 17;38:5B.5.1-5B.5.16. doi: 10.1002/cpsc.14. Curr Protoc Stem Cell Biol. 2016. PMID: 27532819 Free PMC article.
IDR2D identifies reproducible genomic interactions.
Krismer K, Guo Y, Gifford DK. Krismer K, et al. Nucleic Acids Res. 2020 Apr 6;48(6):e31. doi: 10.1093/nar/gkaa030. Nucleic Acids Res. 2020. PMID: 32009147 Free PMC article.
Ranking reprogramming factors for cell differentiation.
Hammelman J, Patel T, Closser M, Wichterle H, Gifford D. Hammelman J, et al. Nat Methods. 2022 Jul;19(7):812-822. doi: 10.1038/s41592-022-01522-2. Epub 2022 Jun 16. Nat Methods. 2022. PMID: 35710610 Free PMC article.
A CRISPR view of gene regulation.
Banerjee B, Sherwood RI. Banerjee B, et al. Curr Opin Syst Biol. 2017 Feb;1:1-8. doi: 10.1016/j.coisb.2016.12.016. Epub 2017 Feb 28. Curr Opin Syst Biol. 2017. PMID: 28966990 Free PMC article.
Cas9 Functionally Opens Chromatin.
Barkal AA, Srinivasan S, Hashimoto T, Gifford DK, Sherwood RI. Barkal AA, et al. PLoS One. 2016 Mar 31;11(3):e0152683. doi: 10.1371/journal.pone.0152683. eCollection 2016. PLoS One. 2016. PMID: 27031353 Free PMC article.
High-throughput mapping of regulatory DNA.
Rajagopal N, Srinivasan S, Kooshesh K, Guo Y, Edwards MD, Banerjee B, Syed T, Emons BJ, Gifford DK, Sherwood RI. Rajagopal N, et al. Nat Biotechnol. 2016 Feb;34(2):167-74. doi: 10.1038/nbt.3468. Epub 2016 Jan 25. Nat Biotechnol. 2016. PMID: 26807528 Free PMC article.
24 results