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2020 5
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2023 2
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Page 1
Expanded encyclopaedias of DNA elements in the human and mouse genomes.
ENCODE Project Consortium; Moore JE, Purcaro MJ, Pratt HE, Epstein CB, Shoresh N, Adrian J, Kawli T, Davis CA, Dobin A, Kaul R, Halow J, Van Nostrand EL, Freese P, Gorkin DU, Shen Y, He Y, Mackiewicz M, Pauli-Behn F, Williams BA, Mortazavi A, Keller CA, Zhang XO, Elhajjajy SI, Huey J, Dickel DE, Snetkova V, Wei X, Wang X, Rivera-Mulia JC, Rozowsky J, Zhang J, Chhetri SB, Zhang J, Victorsen A, White KP, Visel A, Yeo GW, Burge CB, Lécuyer E, Gilbert DM, Dekker J, Rinn J, Mendenhall EM, Ecker JR, Kellis M, Klein RJ, Noble WS, Kundaje A, Guigó R, Farnham PJ, Cherry JM, Myers RM, Ren B, Graveley BR, Gerstein MB, Pennacchio LA, Snyder MP, Bernstein BE, Wold B, Hardison RC, Gingeras TR, Stamatoyannopoulos JA, Weng Z. ENCODE Project Consortium, et al. Nature. 2020 Jul;583(7818):699-710. doi: 10.1038/s41586-020-2493-4. Epub 2020 Jul 29. Nature. 2020. PMID: 32728249 Free PMC article.
Perspectives on ENCODE.
ENCODE Project Consortium; Snyder MP, Gingeras TR, Moore JE, Weng Z, Gerstein MB, Ren B, Hardison RC, Stamatoyannopoulos JA, Graveley BR, Feingold EA, Pazin MJ, Pagan M, Gilchrist DA, Hitz BC, Cherry JM, Bernstein BE, Mendenhall EM, Zerbino DR, Frankish A, Flicek P, Myers RM. ENCODE Project Consortium, et al. Nature. 2020 Jul;583(7818):693-698. doi: 10.1038/s41586-020-2449-8. Epub 2020 Jul 29. Nature. 2020. PMID: 32728248 Free PMC article.
Author Correction: Perspectives on ENCODE.
ENCODE Project Consortium; Snyder MP, Gingeras TR, Moore JE, Weng Z, Gerstein MB, Ren B, Hardison RC, Stamatoyannopoulos JA, Graveley BR, Feingold EA, Pazin MJ, Pagan M, Gilchrist DA, Hitz BC, Cherry JM, Bernstein BE, Mendenhall EM, Zerbino DR, Frankish A, Flicek P, Myers RM. ENCODE Project Consortium, et al. Nature. 2022 May;605(7909):E4. doi: 10.1038/s41586-021-04213-8. Nature. 2022. PMID: 35474002 Free PMC article. No abstract available.
Ancient introgression drives adaptation to cooler and drier mountain habitats in a cypress species complex.
Ma Y, Wang J, Hu Q, Li J, Sun Y, Zhang L, Abbott RJ, Liu J, Mao K. Ma Y, et al. Commun Biol. 2019 Jun 18;2:213. doi: 10.1038/s42003-019-0445-z. eCollection 2019. Commun Biol. 2019. PMID: 31240251 Free PMC article.
Applying whole-transcriptome sequencing and population genetic analyses, we present an example of ancient introgression from a cypress species (Cupressus gigantea) that occurs at higher latitude and elevation on the Qinghai-Tibet Plateau into a related species (C. duclouxiana), w …
Applying whole-transcriptome sequencing and population genetic analyses, we present an example of ancient introgression from a cypress speci …
Hydroclimatic vulnerability of peat carbon in the central Congo Basin.
Garcin Y, Schefuß E, Dargie GC, Hawthorne D, Lawson IT, Sebag D, Biddulph GE, Crezee B, Bocko YE, Ifo SA, Mampouya Wenina YE, Mbemba M, Ewango CEN, Emba O, Bola P, Kanyama Tabu J, Tyrrell G, Young DM, Gassier G, Girkin NT, Vane CH, Adatte T, Baird AJ, Boom A, Gulliver P, Morris PJ, Page SE, Sjögersten S, Lewis SL. Garcin Y, et al. Nature. 2022 Dec;612(7939):277-282. doi: 10.1038/s41586-022-05389-3. Epub 2022 Nov 2. Nature. 2022. PMID: 36323786 Free PMC article.
The data imply that the drying climate probably resulted in a regional drop in the water table, which triggered peat decomposition, including the loss of peat carbon accumulated prior to the onset of the drier conditions. After approximately 2,000 cal. yr BP, our data show …
The data imply that the drying climate probably resulted in a regional drop in the water table, which triggered peat decomposition, includin …
Dry growing seasons predicted Central American migration to the US from 2012 to 2018.
Linke A, Leutert S, Busby J, Duque M, Shawcroft M, Brewer S. Linke A, et al. Sci Rep. 2023 Oct 26;13(1):18400. doi: 10.1038/s41598-023-43668-9. Sci Rep. 2023. PMID: 37884560 Free PMC article.
Controlling for factors such as criminal violence and poverty, we tested if drier than usual growing season weather was a predictor of emigration from El Salvador, Guatemala, and Honduras to the US between 2012 and 2018. ...We found 70.7% more emigration to the US when loc …
Controlling for factors such as criminal violence and poverty, we tested if drier than usual growing season weather was a predictor o …
Wellbuilt for wellbeing: Controlling relative humidity in the workplace matters for our health.
Razjouyan J, Lee H, Gilligan B, Lindberg C, Nguyen H, Canada K, Burton A, Sharafkhaneh A, Srinivasan K, Currim F, Ram S, Mehl MR, Goebel N, Lunden M, Bhangar S, Heerwagen J, Kampschroer K, Sternberg EM, Najafi B. Razjouyan J, et al. Indoor Air. 2020 Jan;30(1):167-179. doi: 10.1111/ina.12618. Epub 2019 Nov 25. Indoor Air. 2020. PMID: 31663168 Free PMC article.
Those who spent the majority of their time at the office in conditions of 30%-60% RH experienced 25% less stress at the office than those who spent the majority of their time in drier conditions. Further, a correlational study of our stress response suggests optimal values …
Those who spent the majority of their time at the office in conditions of 30%-60% RH experienced 25% less stress at the office than those wh …
Plants and earthworms control soil carbon and water quality trade-offs in turfgrass mesocosms.
Peach ME, Hicks Pries CE, Friedland AJ. Peach ME, et al. Sci Total Environ. 2021 Jan 20;753:141884. doi: 10.1016/j.scitotenv.2020.141884. Epub 2020 Aug 22. Sci Total Environ. 2021. PMID: 33207442
Turfgrass mesocosms with earthworms retained less soil C (6.10 0.20 kg/m(2)), especially when warmer. Soils planted with shrubs were drier and had 7% lower mean respiration rates than soils without shrubs. ...
Turfgrass mesocosms with earthworms retained less soil C (6.10 0.20 kg/m(2)), especially when warmer. Soils planted with shrubs were drie
Ecological filtering shapes the impacts of agricultural deforestation on biodiversity.
Hua F, Wang W, Nakagawa S, Liu S, Miao X, Yu L, Du Z, Abrahamczyk S, Arias-Sosa LA, Buda K, Budka M, Carrière SM, Chandler RB, Chiatante G, Chiawo DO, Cresswell W, Echeverri A, Goodale E, Huang G, Hulme MF, Hutto RL, Imboma TS, Jarrett C, Jiang Z, Kati VI, King DI, Kmecl P, Li N, Lövei GL, Macchi L, MacGregor-Fors I, Martin EA, Mira A, Morelli F, Ortega-Álvarez R, Quan RC, Salgueiro PA, Santos SM, Shahabuddin G, Socolar JB, Soh MCK, Sreekar R, Srinivasan U, Wilcove DS, Yamaura Y, Zhou L, Elsen PR. Hua F, et al. Nat Ecol Evol. 2024 Feb;8(2):251-266. doi: 10.1038/s41559-023-02280-w. Epub 2024 Jan 5. Nat Ecol Evol. 2024. PMID: 38182682
For assemblages under greater environmental variability-proxied by drier and more seasonal climates under a greater disturbance regime-and longer deforestation histories, filtering has attenuated the negative impacts of current deforestation by selecting for functional tra …
For assemblages under greater environmental variability-proxied by drier and more seasonal climates under a greater disturbance regim …
Keeping an ear out: size relationship of the tympanic bullae and pinnae in bandicoots and bilbies (Marsupialia: Peramelemorphia).
Taylor MC, Travouillon KJ, Andrew ME, Fleming PA, Warburton NM. Taylor MC, et al. Curr Zool. 2021 Jul 10;68(3):251-264. doi: 10.1093/cz/zoab055. eCollection 2022 Jun. Curr Zool. 2021. PMID: 35592340 Free PMC article.
Controlling for phylogenetic relatedness and skull length, tympanic bulla volume was negatively correlated with precipitation. Species that inhabited drier habitats, which would be open and allow sound to carry further with less obstruction, had relatively larger pinnae an …
Controlling for phylogenetic relatedness and skull length, tympanic bulla volume was negatively correlated with precipitation. Species that …
23 results