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Using the DFCI gene index databases for biological discovery.
Antonescu C, Antonescu V, Sultana R, Quackenbush J. Antonescu C, et al. Among authors: antonescu v. Curr Protoc Bioinformatics. 2010 Mar;Chapter 1:1.6.1-1.6.36. doi: 10.1002/0471250953.bi0106s29. Curr Protoc Bioinformatics. 2010. PMID: 20205187 Free PMC article.
Cross-referencing eukaryotic genomes: TIGR Orthologous Gene Alignments (TOGA).
Lee Y, Sultana R, Pertea G, Cho J, Karamycheva S, Tsai J, Parvizi B, Cheung F, Antonescu V, White J, Holt I, Liang F, Quackenbush J. Lee Y, et al. Among authors: antonescu v. Genome Res. 2002 Mar;12(3):493-502. doi: 10.1101/gr.212002. Genome Res. 2002. PMID: 11875039 Free PMC article.
POPcorn: An Online Resource Providing Access to Distributed and Diverse Maize Project Data.
Cannon EK, Birkett SM, Braun BL, Kodavali S, Jennewein DM, Yilmaz A, Antonescu V, Antonescu C, Harper LC, Gardiner JM, Schaeffer ML, Campbell DA, Andorf CM, Andorf D, Lisch D, Koch KE, McCarty DR, Quackenbush J, Grotewold E, Lushbough CM, Sen TZ, Lawrence CJ. Cannon EK, et al. Among authors: antonescu v. Int J Plant Genomics. 2011;2011:923035. doi: 10.1155/2011/923035. Epub 2011 Dec 27. Int J Plant Genomics. 2011. PMID: 22253616 Free PMC article.
Assembly of a pan-genome from deep sequencing of 910 humans of African descent.
Sherman RM, Forman J, Antonescu V, Puiu D, Daya M, Rafaels N, Boorgula MP, Chavan S, Vergara C, Ortega VE, Levin AM, Eng C, Yazdanbakhsh M, Wilson JG, Marrugo J, Lange LA, Williams LK, Watson H, Ware LB, Olopade CO, Olopade O, Oliveira RR, Ober C, Nicolae DL, Meyers DA, Mayorga A, Knight-Madden J, Hartert T, Hansel NN, Foreman MG, Ford JG, Faruque MU, Dunston GM, Caraballo L, Burchard EG, Bleecker ER, Araujo MI, Herrera-Paz EF, Campbell M, Foster C, Taub MA, Beaty TH, Ruczinski I, Mathias RA, Barnes KC, Salzberg SL. Sherman RM, et al. Among authors: antonescu v. Nat Genet. 2019 Jan;51(1):30-35. doi: 10.1038/s41588-018-0273-y. Epub 2018 Nov 19. Nat Genet. 2019. PMID: 30455414 Free PMC article.
Author Correction: Assembly of a pan-genome from deep sequencing of 910 humans of African descent.
Sherman RM, Forman J, Antonescu V, Puiu D, Daya M, Rafaels N, Boorgula MP, Chavan S, Vergara C, Ortega VE, Levin AM, Eng C, Yazdanbakhsh M, Wilson JG, Marrugo J, Lange LA, Williams LK, Watson H, Ware LB, Olopade CO, Olopade O, Oliveira RR, Ober C, Nicolae DL, Meyers DA, Mayorga A, Knight-Madden J, Hartert T, Hansel NN, Foreman MG, Ford JG, Faruque MU, Dunston GM, Caraballo L, Burchard EG, Bleecker ER, Araujo MI, Herrera-Paz EF, Campbell M, Foster C, Taub MA, Beaty TH, Ruczinski I, Mathias RA, Barnes KC, Salzberg SL. Sherman RM, et al. Among authors: antonescu v. Nat Genet. 2019 Feb;51(2):364. doi: 10.1038/s41588-018-0335-1. Nat Genet. 2019. PMID: 30647471
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