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Holmes A, Carvalho-Silva D, Sondka Z, Ahmed M, Argasinska J, Lyne R, Sangrador-Vegas A, Ward S. Holmes A, et al. Among authors: argasinska j. PLoS Biol. 2024 Jan 25;22(1):e3002477. doi: 10.1371/journal.pbio.3002477. eCollection 2024 Jan. PLoS Biol. 2024. PMID: 38271296 Free PMC article.
COSMIC: a curated database of somatic variants and clinical data for cancer.
Sondka Z, Dhir NB, Carvalho-Silva D, Jupe S, Madhumita, McLaren K, Starkey M, Ward S, Wilding J, Ahmed M, Argasinska J, Beare D, Chawla MS, Duke S, Fasanella I, Neogi AG, Haller S, Hetenyi B, Hodges L, Holmes A, Lyne R, Maurel T, Nair S, Pedro H, Sangrador-Vegas A, Schuilenburg H, Sheard Z, Yong SY, Teague J. Sondka Z, et al. Among authors: argasinska j. Nucleic Acids Res. 2024 Jan 5;52(D1):D1210-D1217. doi: 10.1093/nar/gkad986. Nucleic Acids Res. 2024. PMID: 38183204 Free PMC article.
Rfam 14: expanded coverage of metagenomic, viral and microRNA families.
Kalvari I, Nawrocki EP, Ontiveros-Palacios N, Argasinska J, Lamkiewicz K, Marz M, Griffiths-Jones S, Toffano-Nioche C, Gautheret D, Weinberg Z, Rivas E, Eddy SR, Finn RD, Bateman A, Petrov AI. Kalvari I, et al. Among authors: argasinska j. Nucleic Acids Res. 2021 Jan 8;49(D1):D192-D200. doi: 10.1093/nar/gkaa1047. Nucleic Acids Res. 2021. PMID: 33211869 Free PMC article.
Transcriptome visualization and data availability at the Saccharomyces Genome Database.
Ng PC, Wong ED, MacPherson KA, Aleksander S, Argasinska J, Dunn B, Nash RS, Skrzypek MS, Gondwe F, Jha S, Karra K, Weng S, Miyasato S, Simison M, Engel SR, Cherry JM. Ng PC, et al. Among authors: argasinska j. Nucleic Acids Res. 2020 Jan 8;48(D1):D743-D748. doi: 10.1093/nar/gkz892. Nucleic Acids Res. 2020. PMID: 31612944 Free PMC article.
Non-Coding RNA Analysis Using the Rfam Database.
Kalvari I, Nawrocki EP, Argasinska J, Quinones-Olvera N, Finn RD, Bateman A, Petrov AI. Kalvari I, et al. Among authors: argasinska j. Curr Protoc Bioinformatics. 2018 Jun;62(1):e51. doi: 10.1002/cpbi.51. Epub 2018 Jun 5. Curr Protoc Bioinformatics. 2018. PMID: 29927072 Free PMC article.
Rfam 13.0: shifting to a genome-centric resource for non-coding RNA families.
Kalvari I, Argasinska J, Quinones-Olvera N, Nawrocki EP, Rivas E, Eddy SR, Bateman A, Finn RD, Petrov AI. Kalvari I, et al. Among authors: argasinska j. Nucleic Acids Res. 2018 Jan 4;46(D1):D335-D342. doi: 10.1093/nar/gkx1038. Nucleic Acids Res. 2018. PMID: 29112718 Free PMC article.
15 results