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Genetic Drivers of Pancreatic Islet Function.
Keller MP, Gatti DM, Schueler KL, Rabaglia ME, Stapleton DS, Simecek P, Vincent M, Allen S, Broman AT, Bacher R, Kendziorski C, Broman KW, Yandell BS, Churchill GA, Attie AD. Keller MP, et al. Among authors: bacher r. Genetics. 2018 May;209(1):335-356. doi: 10.1534/genetics.118.300864. Epub 2018 Mar 22. Genetics. 2018. PMID: 29567659 Free PMC article.
SCnorm: robust normalization of single-cell RNA-seq data.
Bacher R, Chu LF, Leng N, Gasch AP, Thomson JA, Stewart RM, Newton M, Kendziorski C. Bacher R, et al. Nat Methods. 2017 Jun;14(6):584-586. doi: 10.1038/nmeth.4263. Epub 2017 Apr 17. Nat Methods. 2017. PMID: 28418000 Free PMC article.
Automated minute scale RNA-seq of pluripotent stem cell differentiation reveals early divergence of human and mouse gene expression kinetics.
Barry C, Schmitz MT, Argus C, Bolin JM, Probasco MD, Leng N, Duffin BM, Steill J, Swanson S, McIntosh BE, Stewart R, Kendziorski C, Thomson JA, Bacher R. Barry C, et al. Among authors: bacher r. PLoS Comput Biol. 2019 Dec 9;15(12):e1007543. doi: 10.1371/journal.pcbi.1007543. eCollection 2019 Dec. PLoS Comput Biol. 2019. PMID: 31815944 Free PMC article.
Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis.
Seirup M, Chu LF, Sengupta S, Leng N, Browder H, Kapadia K, Shafer CM, Duffin B, Elwell AL, Bolin JM, Swanson S, Stewart R, Kendziorski C, Thomson JA, Bacher R. Seirup M, et al. Among authors: bacher r. PLoS One. 2020 Sep 28;15(9):e0239711. doi: 10.1371/journal.pone.0239711. eCollection 2020. PLoS One. 2020. PMID: 32986734 Free PMC article.
64 results