Bader GD - Search Results

1

Metabolomic profiling in liver of adiponectin-knockout mice uncovers lysophospholipid metabolism as an important target of adiponectin action.

Liu Y, Sen S, Wannaiampikul S, Palanivel R, Hoo RL, Isserlin R, Bader GD, Tungtrongchitr R, Deshaies Y, Xu A, Sweeney G. Liu Y, et al. Among authors: bader gd. Biochem J. 2015 Jul 1;469(1):71-82. doi: 10.1042/BJ20141455. Epub 2015 Apr 27. Biochem J. 2015. PMID: 25915851 Free PMC article.

2

SeqHound: biological sequence and structure database as a platform for bioinformatics research.

Michalickova K, Bader GD, Dumontier M, Lieu H, Betel D, Isserlin R, Hogue CW. Michalickova K, et al. Among authors: bader gd. BMC Bioinformatics. 2002 Oct 25;3:32. doi: 10.1186/1471-2105-3-32. Epub 2002 Oct 25. BMC Bioinformatics. 2002. PMID: 12401134 Free PMC article.

3

Pathway analysis of dilated cardiomyopathy using global proteomic profiling and enrichment maps.

Isserlin R, Merico D, Alikhani-Koupaei R, Gramolini A, Bader GD, Emili A. Isserlin R, et al. Among authors: bader gd. Proteomics. 2010 Mar;10(6):1316-27. doi: 10.1002/pmic.200900412. Proteomics. 2010. PMID: 20127684 Free PMC article.

4

Enrichment map: a network-based method for gene-set enrichment visualization and interpretation.

Merico D, Isserlin R, Stueker O, Emili A, Bader GD. Merico D, et al. Among authors: bader gd. PLoS One. 2010 Nov 15;5(11):e13984. doi: 10.1371/journal.pone.0013984. PLoS One. 2010. PMID: 21085593 Free PMC article.

5

The Biomolecular Interaction Network Database in PSI-MI 2.5.

Isserlin R, El-Badrawi RA, Bader GD. Isserlin R, et al. Among authors: bader gd. Database (Oxford). 2011 Jan 12;2011:baq037. doi: 10.1093/database/baq037. Print 2011. Database (Oxford). 2011. PMID: 21233089 Free PMC article.

6

Too many roads not taken.

Edwards AM, Isserlin R, Bader GD, Frye SV, Willson TM, Yu FH. Edwards AM, et al. Among authors: bader gd. Nature. 2011 Feb 10;470(7333):163-5. doi: 10.1038/470163a. Nature. 2011. PMID: 21307913 No abstract available.

7

WordCloud: a Cytoscape plugin to create a visual semantic summary of networks.

Oesper L, Merico D, Isserlin R, Bader GD. Oesper L, et al. Among authors: bader gd. Source Code Biol Med. 2011 Apr 7;6:7. doi: 10.1186/1751-0473-6-7. Source Code Biol Med. 2011. PMID: 21473782 Free PMC article.

8

Visualizing gene-set enrichment results using the Cytoscape plug-in enrichment map.

Merico D, Isserlin R, Bader GD. Merico D, et al. Among authors: bader gd. Methods Mol Biol. 2011;781:257-77. doi: 10.1007/978-1-61779-276-2_12. Methods Mol Biol. 2011. PMID: 21877285

9

Enrichment Map - a Cytoscape app to visualize and explore OMICs pathway enrichment results.

Isserlin R, Merico D, Voisin V, Bader GD. Isserlin R, et al. Among authors: bader gd. F1000Res. 2014 Jul 1;3:141. doi: 10.12688/f1000research.4536.1. eCollection 2014. F1000Res. 2014. PMID: 25075306 Free PMC article.

10

Systems analysis reveals down-regulation of a network of pro-survival miRNAs drives the apoptotic response in dilated cardiomyopathy.

Isserlin R, Merico D, Wang D, Vuckovic D, Bousette N, Gramolini AO, Bader GD, Emili A. Isserlin R, et al. Among authors: bader gd. Mol Biosyst. 2015 Jan;11(1):239-51. doi: 10.1039/c4mb00265b. Epub 2014 Oct 31. Mol Biosyst. 2015. PMID: 25361207 Free PMC article.

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