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Comparative genomic evidence for a close relationship between the dimorphic prosthecate bacteria Hyphomonas neptunium and Caulobacter crescentus.
Badger JH, Hoover TR, Brun YV, Weiner RM, Laub MT, Alexandre G, Mrázek J, Ren Q, Paulsen IT, Nelson KE, Khouri HM, Radune D, Sosa J, Dodson RJ, Sullivan SA, Rosovitz MJ, Madupu R, Brinkac LM, Durkin AS, Daugherty SC, Kothari SP, Giglio MG, Zhou L, Haft DH, Selengut JD, Davidsen TM, Yang Q, Zafar N, Ward NL. Badger JH, et al. J Bacteriol. 2006 Oct;188(19):6841-50. doi: 10.1128/JB.00111-06. J Bacteriol. 2006. PMID: 16980487 Free PMC article.
Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.
Ward NL, Challacombe JF, Janssen PH, Henrissat B, Coutinho PM, Wu M, Xie G, Haft DH, Sait M, Badger J, Barabote RD, Bradley B, Brettin TS, Brinkac LM, Bruce D, Creasy T, Daugherty SC, Davidsen TM, DeBoy RT, Detter JC, Dodson RJ, Durkin AS, Ganapathy A, Gwinn-Giglio M, Han CS, Khouri H, Kiss H, Kothari SP, Madupu R, Nelson KE, Nelson WC, Paulsen I, Penn K, Ren Q, Rosovitz MJ, Selengut JD, Shrivastava S, Sullivan SA, Tapia R, Thompson LS, Watkins KL, Yang Q, Yu C, Zafar N, Zhou L, Kuske CR. Ward NL, et al. Appl Environ Microbiol. 2009 Apr;75(7):2046-56. doi: 10.1128/AEM.02294-08. Epub 2009 Feb 5. Appl Environ Microbiol. 2009. PMID: 19201974 Free PMC article.
Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species.
Fouts DE, Mongodin EF, Mandrell RE, Miller WG, Rasko DA, Ravel J, Brinkac LM, DeBoy RT, Parker CT, Daugherty SC, Dodson RJ, Durkin AS, Madupu R, Sullivan SA, Shetty JU, Ayodeji MA, Shvartsbeyn A, Schatz MC, Badger JH, Fraser CM, Nelson KE. Fouts DE, et al. Among authors: badger jh. PLoS Biol. 2005 Jan;3(1):e15. doi: 10.1371/journal.pbio.0030015. Epub 2005 Jan 4. PLoS Biol. 2005. PMID: 15660156 Free PMC article.
Complete genome sequence of the N2-fixing broad host range endophyte Klebsiella pneumoniae 342 and virulence predictions verified in mice.
Fouts DE, Tyler HL, DeBoy RT, Daugherty S, Ren Q, Badger JH, Durkin AS, Huot H, Shrivastava S, Kothari S, Dodson RJ, Mohamoud Y, Khouri H, Roesch LF, Krogfelt KA, Struve C, Triplett EW, Methé BA. Fouts DE, et al. Among authors: badger jh. PLoS Genet. 2008 Jul 25;4(7):e1000141. doi: 10.1371/journal.pgen.1000141. PLoS Genet. 2008. PMID: 18654632 Free PMC article.
Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus.
Myers GS, Parker D, Al-Hasani K, Kennan RM, Seemann T, Ren Q, Badger JH, Selengut JD, Deboy RT, Tettelin H, Boyce JD, McCarl VP, Han X, Nelson WC, Madupu R, Mohamoud Y, Holley T, Fedorova N, Khouri H, Bottomley SP, Whittington RJ, Adler B, Songer JG, Rood JI, Paulsen IT. Myers GS, et al. Among authors: badger jh. Nat Biotechnol. 2007 May;25(5):569-75. doi: 10.1038/nbt1302. Epub 2007 Apr 29. Nat Biotechnol. 2007. PMID: 17468768
Genome sequence of Synechococcus CC9311: Insights into adaptation to a coastal environment.
Palenik B, Ren Q, Dupont CL, Myers GS, Heidelberg JF, Badger JH, Madupu R, Nelson WC, Brinkac LM, Dodson RJ, Durkin AS, Daugherty SC, Sullivan SA, Khouri H, Mohamoud Y, Halpin R, Paulsen IT. Palenik B, et al. Among authors: badger jh. Proc Natl Acad Sci U S A. 2006 Sep 5;103(36):13555-9. doi: 10.1073/pnas.0602963103. Epub 2006 Aug 25. Proc Natl Acad Sci U S A. 2006. PMID: 16938853 Free PMC article.
69 results