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384 results

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Reproducible variability: assessing investigator discordance across 9 research teams attempting to reproduce the same observational study.
Ostropolets A, Albogami Y, Conover M, Banda JM, Baumgartner WA, Blacketer C, Desai P, DuVall SL, Fortin S, Gilbert JP, Golozar A, Ide J, Kanter AS, Kern DM, Kim C, Lai LYH, Li C, Liu F, Lynch KE, Minty E, Neves MI, Ng DQ, Obene T, Pera V, Pratt N, Rao G, Rappoport N, Reinecke I, Saroufim P, Shoaibi A, Simon K, Suchard MA, Swerdel JN, Voss EA, Weaver J, Zhang L, Hripcsak G, Ryan PB. Ostropolets A, et al. Among authors: baumgartner wa. J Am Med Inform Assoc. 2023 Apr 19;30(5):859-868. doi: 10.1093/jamia/ocad009. J Am Med Inform Assoc. 2023. PMID: 36826399 Free PMC article.
An open source knowledge graph ecosystem for the life sciences.
Callahan TJ, Tripodi IJ, Stefanski AL, Cappelletti L, Taneja SB, Wyrwa JM, Casiraghi E, Matentzoglu NA, Reese J, Silverstein JC, Hoyt CT, Boyce RD, Malec SA, Unni DR, Joachimiak MP, Robinson PN, Mungall CJ, Cavalleri E, Fontana T, Valentini G, Mesiti M, Gillenwater LA, Santangelo B, Vasilevsky NA, Hoehndorf R, Bennett TD, Ryan PB, Hripcsak G, Kahn MG, Bada M, Baumgartner WA Jr, Hunter LE. Callahan TJ, et al. Among authors: baumgartner wa jr. Sci Data. 2024 Apr 11;11(1):363. doi: 10.1038/s41597-024-03171-w. Sci Data. 2024. PMID: 38605048 Free PMC article.
Betanodavirus meningoencephalitis in an Atlantic blue marlin.
Cook KA, Hawke JP, Groman DB, Pretto T, Toffan A, Hanson LA, Nguyen D, Ford L, Baumgartner WA. Cook KA, et al. Among authors: baumgartner wa. J Vet Diagn Invest. 2024 Feb 8:10406387231218223. doi: 10.1177/10406387231218223. Online ahead of print. J Vet Diagn Invest. 2024. PMID: 38331725
The Exit Strategy: Preparing for Retirement.
Baumgartner WA. Baumgartner WA. Thorac Surg Clin. 2024 Feb;34(1):105-110. doi: 10.1016/j.thorsurg.2023.08.008. Epub 2023 Sep 15. Thorac Surg Clin. 2024. PMID: 37953047 Review.
Flavobacterium covae is the predominant species of columnaris-causing bacteria impacting the Channel Catfish industry in the southeastern United States.
LaFrentz BR, Khoo LH, Lawrence ML, Petrie-Hanson L, Hanson LA, Baumgartner WA, Hemstreet WG, Kelly AM, García JC, Shelley JP, Johnston AE, Bruce TJ, Griffin MJ. LaFrentz BR, et al. Among authors: baumgartner wa. J Aquat Anim Health. 2024 Mar;36(1):3-15. doi: 10.1002/aah.10207. Epub 2024 Jan 14. J Aquat Anim Health. 2024. PMID: 37859458
Ontologizing health systems data at scale: making translational discovery a reality.
Callahan TJ, Stefanski AL, Wyrwa JM, Zeng C, Ostropolets A, Banda JM, Baumgartner WA Jr, Boyce RD, Casiraghi E, Coleman BD, Collins JH, Deakyne Davies SJ, Feinstein JA, Lin AY, Martin B, Matentzoglu NA, Meeker D, Reese J, Sinclair J, Taneja SB, Trinkley KE, Vasilevsky NA, Williams AE, Zhang XA, Denny JC, Ryan PB, Hripcsak G, Bennett TD, Haendel MA, Robinson PN, Hunter LE, Kahn MG. Callahan TJ, et al. Among authors: baumgartner wa jr. NPJ Digit Med. 2023 May 19;6(1):89. doi: 10.1038/s41746-023-00830-x. NPJ Digit Med. 2023. PMID: 37208468 Free PMC article.
A practical protocol to prepare paraffin-embedded whole tick histology sections.
Yang TS, LaDouceur EEB, Baumgartner WA, Marr HS, Karounos M, Robertson J, Whitehurst N, Miller LS, Birkenheuer AJ. Yang TS, et al. Among authors: baumgartner wa. Ticks Tick Borne Dis. 2023 Jul;14(4):102162. doi: 10.1016/j.ttbdis.2023.102162. Epub 2023 Mar 23. Ticks Tick Borne Dis. 2023. PMID: 36965259 Free PMC article.
384 results