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Physics and evolution of thermophilic adaptation.
Berezovsky IN, Shakhnovich EI. Berezovsky IN, et al. Proc Natl Acad Sci U S A. 2005 Sep 6;102(36):12742-7. doi: 10.1073/pnas.0503890102. Epub 2005 Aug 24. Proc Natl Acad Sci U S A. 2005. PMID: 16120678 Free PMC article.
Physical origins of protein superfamilies.
Zeldovich KB, Berezovsky IN, Shakhnovich EI. Zeldovich KB, et al. Among authors: berezovsky in. J Mol Biol. 2006 Apr 7;357(4):1335-43. doi: 10.1016/j.jmb.2006.01.081. Epub 2006 Feb 6. J Mol Biol. 2006. PMID: 16483605
Protein and DNA sequence determinants of thermophilic adaptation.
Zeldovich KB, Berezovsky IN, Shakhnovich EI. Zeldovich KB, et al. Among authors: berezovsky in. PLoS Comput Biol. 2007 Jan 12;3(1):e5. doi: 10.1371/journal.pcbi.0030005. Epub 2006 Nov 30. PLoS Comput Biol. 2007. PMID: 17222055 Free PMC article.
Exploring the evolution of protein function in Archaea.
Goncearenco A, Berezovsky IN. Goncearenco A, et al. Among authors: berezovsky in. BMC Evol Biol. 2012 May 30;12:75. doi: 10.1186/1471-2148-12-75. BMC Evol Biol. 2012. PMID: 22646318 Free PMC article.
Distinct stages of protein evolution as suggested by protein sequence analysis.
Trifonov EN, Kirzhner A, Kirzhner VM, Berezovsky IN. Trifonov EN, et al. Among authors: berezovsky in. J Mol Evol. 2001 Oct-Nov;53(4-5):394-401. doi: 10.1007/s002390010229. J Mol Evol. 2001. PMID: 11675599
Traces of the predicted mosaic structure have been, indeed, detected in the protein sequences of complete prokaryotic genomes in the form of weak oscillations with the period 12 residues in the form of alteration of two types of 6 residue long units. The next …
Traces of the predicted mosaic structure have been, indeed, detected in the protein sequences of complete prokaryotic genomes in …
Protein sequences yield a proteomic code.
Berezovsky IN, Kirzhner A, Kirzhner VM, Rosenfeld VR, Trifonov EN. Berezovsky IN, et al. J Biomol Struct Dyn. 2003 Dec;21(3):317-25. doi: 10.1080/07391102.2003.10506928. J Biomol Struct Dyn. 2003. PMID: 14616028
86 results