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More compact protein globules exhibit slower folding rates.
Galzitskaya OV, Reifsnyder DC, Bogatyreva NS, Ivankov DN, Garbuzynskiy SO. Galzitskaya OV, et al. Among authors: bogatyreva ns. Proteins. 2008 Feb 1;70(2):329-32. doi: 10.1002/prot.21619. Proteins. 2008. PMID: 17876831
Compactness determines protein folding type.
Galzitskaya OV, Bogatyreva NS, Ivankov DN. Galzitskaya OV, et al. Among authors: bogatyreva ns. J Bioinform Comput Biol. 2008 Aug;6(4):667-80. doi: 10.1142/s0219720008003618. J Bioinform Comput Biol. 2008. PMID: 18763735
KineticDB: a database of protein folding kinetics.
Bogatyreva NS, Osypov AA, Ivankov DN. Bogatyreva NS, et al. Nucleic Acids Res. 2009 Jan;37(Database issue):D342-6. doi: 10.1093/nar/gkn696. Epub 2008 Oct 8. Nucleic Acids Res. 2009. PMID: 18842631 Free PMC article.
Golden triangle for folding rates of globular proteins.
Garbuzynskiy SO, Ivankov DN, Bogatyreva NS, Finkelstein AV. Garbuzynskiy SO, et al. Among authors: bogatyreva ns. Proc Natl Acad Sci U S A. 2013 Jan 2;110(1):147-50. doi: 10.1073/pnas.1210180110. Epub 2012 Dec 18. Proc Natl Acad Sci U S A. 2013. PMID: 23251035 Free PMC article.
Machine Learning: How Much Does It Tell about Protein Folding Rates?
Corrales M, Cuscó P, Usmanova DR, Chen HC, Bogatyreva NS, Filion GJ, Ivankov DN. Corrales M, et al. Among authors: bogatyreva ns. PLoS One. 2015 Nov 25;10(11):e0143166. doi: 10.1371/journal.pone.0143166. eCollection 2015. PLoS One. 2015. PMID: 26606303 Free PMC article.
There and back again: Two views on the protein folding puzzle.
Finkelstein AV, Badretdin AJ, Galzitskaya OV, Ivankov DN, Bogatyreva NS, Garbuzynskiy SO. Finkelstein AV, et al. Among authors: bogatyreva ns. Phys Life Rev. 2017 Jul;21:56-71. doi: 10.1016/j.plrev.2017.01.025. Epub 2017 Jan 27. Phys Life Rev. 2017. PMID: 28190683 Review.
26 results