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High-throughput multimodal automated phenotyping (MAP) with application to PheWAS.
Liao KP, Sun J, Cai TA, Link N, Hong C, Huang J, Huffman JE, Gronsbell J, Zhang Y, Ho YL, Castro V, Gainer V, Murphy SN, O'Donnell CJ, Gaziano JM, Cho K, Szolovits P, Kohane IS, Yu S, Cai T. Liao KP, et al. Among authors: cai ta. J Am Med Inform Assoc. 2019 Nov 1;26(11):1255-1262. doi: 10.1093/jamia/ocz066. J Am Med Inform Assoc. 2019. PMID: 31613361 Free PMC article.
Psychiatric co-morbidity is associated with increased risk of surgery in Crohn's disease.
Ananthakrishnan AN, Gainer VS, Perez RG, Cai T, Cheng SC, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw SY, Churchill S, Karlson EW, Kohane I, Perlis RH, Plenge RM, Murphy SN, Liao KP. Ananthakrishnan AN, et al. Aliment Pharmacol Ther. 2013 Feb;37(4):445-54. doi: 10.1111/apt.12195. Epub 2013 Jan 7. Aliment Pharmacol Ther. 2013. PMID: 23289600 Free PMC article.
Surrogate-assisted feature extraction for high-throughput phenotyping.
Yu S, Chakrabortty A, Liao KP, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Cai T. Yu S, et al. J Am Med Inform Assoc. 2017 Apr 1;24(e1):e143-e149. doi: 10.1093/jamia/ocw135. J Am Med Inform Assoc. 2017. PMID: 27632993 Free PMC article.
A Computable Phenotype Improves Cohort Ascertainment in a Pediatric Pulmonary Hypertension Registry.
Geva A, Gronsbell JL, Cai T, Cai T, Murphy SN, Lyons JC, Heinz MM, Natter MD, Patibandla N, Bickel J, Mullen MP, Mandl KD; Pediatric Pulmonary Hypertension Network and National Heart, Lung, and Blood Institute Pediatric Pulmonary Vascular Disease Outcomes Bioinformatics Clinical Coordinating Center Investigators. Geva A, et al. J Pediatr. 2017 Sep;188:224-231.e5. doi: 10.1016/j.jpeds.2017.05.037. Epub 2017 Jun 16. J Pediatr. 2017. PMID: 28625502 Free PMC article.
Enabling phenotypic big data with PheNorm.
Yu S, Ma Y, Gronsbell J, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Liao KP, Cai T. Yu S, et al. J Am Med Inform Assoc. 2018 Jan 1;25(1):54-60. doi: 10.1093/jamia/ocx111. J Am Med Inform Assoc. 2018. PMID: 29126253 Free PMC article.
48 results