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Installation and use of LabKey Server for proteomics.
Eckels J, Hussey P, Nelson EK, Myers T, Rauch A, Bellew M, Connolly B, Law W, Eng JK, Katz J, McIntosh M, Mallick P, Igra M. Eckels J, et al. Among authors: connolly b. Curr Protoc Bioinformatics. 2011 Dec;Chapter 13:13.5.1-13.5.25. doi: 10.1002/0471250953.bi1305s36. Curr Protoc Bioinformatics. 2011. PMID: 22161569
A cross-platform toolkit for mass spectrometry and proteomics.
Chambers MC, Maclean B, Burke R, Amodei D, Ruderman DL, Neumann S, Gatto L, Fischer B, Pratt B, Egertson J, Hoff K, Kessner D, Tasman N, Shulman N, Frewen B, Baker TA, Brusniak MY, Paulse C, Creasy D, Flashner L, Kani K, Moulding C, Seymour SL, Nuwaysir LM, Lefebvre B, Kuhlmann F, Roark J, Rainer P, Detlev S, Hemenway T, Huhmer A, Langridge J, Connolly B, Chadick T, Holly K, Eckels J, Deutsch EW, Moritz RL, Katz JE, Agus DB, MacCoss M, Tabb DL, Mallick P. Chambers MC, et al. Among authors: connolly b. Nat Biotechnol. 2012 Oct;30(10):918-20. doi: 10.1038/nbt.2377. Nat Biotechnol. 2012. PMID: 23051804 Free PMC article.
A Machine Learning Approach to Identifying Changes in Suicidal Language.
Pestian J, Santel D, Sorter M, Bayram U, Connolly B, Glauser T, DelBello M, Tamang S, Cohen K. Pestian J, et al. Among authors: connolly b. Suicide Life Threat Behav. 2020 Oct;50(5):939-947. doi: 10.1111/sltb.12642. Epub 2020 Jun 2. Suicide Life Threat Behav. 2020. PMID: 32484597
Methodological Issues in Predicting Pediatric Epilepsy Surgery Candidates Through Natural Language Processing and Machine Learning.
Cohen KB, Glass B, Greiner HM, Holland-Bouley K, Standridge S, Arya R, Faist R, Morita D, Mangano F, Connolly B, Glauser T, Pestian J. Cohen KB, et al. Among authors: connolly b. Biomed Inform Insights. 2016 May 22;8:11-8. doi: 10.4137/BII.S38308. eCollection 2016. Biomed Inform Insights. 2016. PMID: 27257386 Free PMC article.
685 results