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Good enough practices in scientific computing.
Wilson G, Bryan J, Cranston K, Kitzes J, Nederbragt L, Teal TK. Wilson G, et al. Among authors: cranston k. PLoS Comput Biol. 2017 Jun 22;13(6):e1005510. doi: 10.1371/journal.pcbi.1005510. eCollection 2017 Jun. PLoS Comput Biol. 2017. PMID: 28640806 Free PMC article.
Best practices for data sharing in phylogenetic research.
Cranston K, Harmon LJ, O'Leary MA, Lisle C. Cranston K, et al. PLoS Curr. 2014 Jun 19;6:ecurrents.tol.bf01eff4a6b60ca4825c69293dc59645. doi: 10.1371/currents.tol.bf01eff4a6b60ca4825c69293dc59645. PLoS Curr. 2014. PMID: 24987572 Free PMC article.
Science incubators: synthesis centers and their role in the research ecosystem.
Rodrigo A, Alberts S, Cranston K, Kingsolver J, Lapp H, McClain C, Smith R, Vision T, Weintraub J, Wiegmann B. Rodrigo A, et al. Among authors: cranston k. PLoS Biol. 2013;11(1):e1001468. doi: 10.1371/journal.pbio.1001468. Epub 2013 Jan 15. PLoS Biol. 2013. PMID: 23335860 Free PMC article.
Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient.
Stoltzfus A, Lapp H, Matasci N, Deus H, Sidlauskas B, Zmasek CM, Vaidya G, Pontelli E, Cranston K, Vos R, Webb CO, Harmon LJ, Pirrung M, O'Meara B, Pennell MW, Mirarab S, Rosenberg MS, Balhoff JP, Bik HM, Heath TA, Midford PE, Brown JW, McTavish EJ, Sukumaran J, Westneat M, Alfaro ME, Steele A, Jordan G. Stoltzfus A, et al. Among authors: cranston k. BMC Bioinformatics. 2013 May 13;14:158. doi: 10.1186/1471-2105-14-158. BMC Bioinformatics. 2013. PMID: 23668630 Free PMC article.
The iPlant Collaborative: Cyberinfrastructure for Plant Biology.
Goff SA, Vaughn M, McKay S, Lyons E, Stapleton AE, Gessler D, Matasci N, Wang L, Hanlon M, Lenards A, Muir A, Merchant N, Lowry S, Mock S, Helmke M, Kubach A, Narro M, Hopkins N, Micklos D, Hilgert U, Gonzales M, Jordan C, Skidmore E, Dooley R, Cazes J, McLay R, Lu Z, Pasternak S, Koesterke L, Piel WH, Grene R, Noutsos C, Gendler K, Feng X, Tang C, Lent M, Kim SJ, Kvilekval K, Manjunath BS, Tannen V, Stamatakis A, Sanderson M, Welch SM, Cranston KA, Soltis P, Soltis D, O'Meara B, Ane C, Brutnell T, Kleibenstein DJ, White JW, Leebens-Mack J, Donoghue MJ, Spalding EP, Vision TJ, Myers CR, Lowenthal D, Enquist BJ, Boyle B, Akoglu A, Andrews G, Ram S, Ware D, Stein L, Stanzione D. Goff SA, et al. Among authors: cranston ka. Front Plant Sci. 2011 Jul 25;2:34. doi: 10.3389/fpls.2011.00034. eCollection 2011. Front Plant Sci. 2011. PMID: 22645531 Free PMC article.
Synthesis of phylogeny and taxonomy into a comprehensive tree of life.
Hinchliff CE, Smith SA, Allman JF, Burleigh JG, Chaudhary R, Coghill LM, Crandall KA, Deng J, Drew BT, Gazis R, Gude K, Hibbett DS, Katz LA, Laughinghouse HD 4th, McTavish EJ, Midford PE, Owen CL, Ree RH, Rees JA, Soltis DE, Williams T, Cranston KA. Hinchliff CE, et al. Among authors: cranston ka. Proc Natl Acad Sci U S A. 2015 Oct 13;112(41):12764-9. doi: 10.1073/pnas.1423041112. Epub 2015 Sep 18. Proc Natl Acad Sci U S A. 2015. PMID: 26385966 Free PMC article.
The Fossil Calibration Database-A New Resource for Divergence Dating.
Ksepka DT, Parham JF, Allman JF, Benton MJ, Carrano MT, Cranston KA, Donoghue PC, Head JJ, Hermsen EJ, Irmis RB, Joyce WG, Kohli M, Lamm KD, Leehr D, Patané JL, Polly PD, Phillips MJ, Smith NA, Smith ND, Van Tuinen M, Ware JL, Warnock RC. Ksepka DT, et al. Syst Biol. 2015 Sep;64(5):853-9. doi: 10.1093/sysbio/syv025. Epub 2015 Apr 27. Syst Biol. 2015. PMID: 25922515
91 results