Dokholyan NV - Search Results

1

RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme.

Miao Z, Adamiak RW, Antczak M, Batey RT, Becka AJ, Biesiada M, Boniecki MJ, Bujnicki JM, Chen SJ, Cheng CY, Chou FC, Ferré-D'Amaré AR, Das R, Dawson WK, Ding F, Dokholyan NV, Dunin-Horkawicz S, Geniesse C, Kappel K, Kladwang W, Krokhotin A, Łach GE, Major F, Mann TH, Magnus M, Pachulska-Wieczorek K, Patel DJ, Piccirilli JA, Popenda M, Purzycka KJ, Ren A, Rice GM, Santalucia J Jr, Sarzynska J, Szachniuk M, Tandon A, Trausch JJ, Tian S, Wang J, Weeks KM, Williams B 2nd, Xiao Y, Xu X, Zhang D, Zok T, Westhof E. Miao Z, et al. Among authors: dokholyan nv. RNA. 2017 May;23(5):655-672. doi: 10.1261/rna.060368.116. Epub 2017 Jan 30. RNA. 2017. PMID: 28138060 Free PMC article.

2

Topological determinants of protein folding.

Dokholyan NV, Li L, Ding F, Shakhnovich EI. Dokholyan NV, et al. Proc Natl Acad Sci U S A. 2002 Jun 25;99(13):8637-41. doi: 10.1073/pnas.122076099. Proc Natl Acad Sci U S A. 2002. PMID: 12084924 Free PMC article.

3

Folding of Cu, Zn superoxide dismutase and familial amyotrophic lateral sclerosis.

Khare SD, Ding F, Dokholyan NV. Khare SD, et al. Among authors: dokholyan nv. J Mol Biol. 2003 Nov 28;334(3):515-25. doi: 10.1016/j.jmb.2003.09.069. J Mol Biol. 2003. PMID: 14623191

4

Identifying importance of amino acids for protein folding from crystal structures.

Dokholyan NV, Borreguero JM, Buldyrev SV, Ding F, Stanley HE, Shakhnovich EI. Dokholyan NV, et al. Methods Enzymol. 2003;374:616-38. doi: 10.1016/S0076-6879(03)74025-7. Methods Enzymol. 2003. PMID: 14696390 No abstract available.

5

Folding Trp-cage to NMR resolution native structure using a coarse-grained protein model.

Ding F, Buldyrev SV, Dokholyan NV. Ding F, et al. Among authors: dokholyan nv. Biophys J. 2005 Jan;88(1):147-55. doi: 10.1529/biophysj.104.046375. Epub 2004 Nov 8. Biophys J. 2005. PMID: 15533926 Free PMC article.

6

New insights into FAK signaling and localization based on detection of a FAT domain folding intermediate.

Dixon RD, Chen Y, Ding F, Khare SD, Prutzman KC, Schaller MD, Campbell SL, Dokholyan NV. Dixon RD, et al. Among authors: dokholyan nv. Structure. 2004 Dec;12(12):2161-71. doi: 10.1016/j.str.2004.09.011. Structure. 2004. PMID: 15576030 Free article.

7

Reconstruction of the src-SH3 protein domain transition state ensemble using multiscale molecular dynamics simulations.

Ding F, Guo W, Dokholyan NV, Shakhnovich EI, Shea JE. Ding F, et al. Among authors: dokholyan nv. J Mol Biol. 2005 Jul 29;350(5):1035-50. doi: 10.1016/j.jmb.2005.05.017. J Mol Biol. 2005. PMID: 15982666

8

Scaling behavior and structure of denatured proteins.

Ding F, Jha RK, Dokholyan NV. Ding F, et al. Among authors: dokholyan nv. Structure. 2005 Jul;13(7):1047-54. doi: 10.1016/j.str.2005.04.009. Structure. 2005. PMID: 16004876 Free article.

9

Simple but predictive protein models.

Ding F, Dokholyan NV. Ding F, et al. Among authors: dokholyan nv. Trends Biotechnol. 2005 Sep;23(9):450-5. doi: 10.1016/j.tibtech.2005.07.001. Trends Biotechnol. 2005. PMID: 16038997

10

Molecular origin of polyglutamine aggregation in neurodegenerative diseases.

Khare SD, Ding F, Gwanmesia KN, Dokholyan NV. Khare SD, et al. Among authors: dokholyan nv. PLoS Comput Biol. 2005 Aug;1(3):230-5. doi: 10.1371/journal.pcbi.0010030. Epub 2005 Aug 26. PLoS Comput Biol. 2005. PMID: 16158094 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

327 results

Search Page