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Assembly of SARS-CoV-2 nucleocapsid protein with nucleic acid.
Zhao H, Syed AM, Khalid MM, Nguyen A, Ciling A, Wu D, Yau WM, Srinivasan S, Esposito D, Doudna JA, Piszczek G, Ott M, Schuck P. Zhao H, et al. Among authors: doudna ja. Nucleic Acids Res. 2024 Apr 8:gkae256. doi: 10.1093/nar/gkae256. Online ahead of print. Nucleic Acids Res. 2024. PMID: 38587193
Omicron mutations enhance infectivity and reduce antibody neutralization of SARS-CoV-2 virus-like particles.
Syed AM, Ciling A, Khalid MM, Sreekumar B, Chen PY, Kumar GR, Silva I, Milbes B, Kojima N, Hess V, Shacreaw M, Lopez L, Brobeck M, Turner F, Spraggon L, Taha TY, Tabata T, Chen IP, Ott M, Doudna JA. Syed AM, et al. Among authors: doudna ja. medRxiv [Preprint]. 2022 Jan 2:2021.12.20.21268048. doi: 10.1101/2021.12.20.21268048. medRxiv. 2022. PMID: 34981067 Free PMC article. Updated. Preprint.
Rapid assembly of SARS-CoV-2 genomes reveals attenuation of the Omicron BA.1 variant through NSP6.
Taha TY, Chen IP, Hayashi JM, Tabata T, Walcott K, Kimmerly GR, Syed AM, Ciling A, Suryawanshi RK, Martin HS, Bach BH, Tsou CL, Montano M, Khalid MM, Sreekumar BK, Kumar GR, Wyman S, Doudna JA, Ott M. Taha TY, et al. Among authors: doudna ja. bioRxiv [Preprint]. 2023 Feb 9:2023.01.31.525914. doi: 10.1101/2023.01.31.525914. bioRxiv. 2023. PMID: 36798416 Free PMC article. Updated. Preprint.
Blueprint for a pop-up SARS-CoV-2 testing lab.
IGI Testing Consortium. IGI Testing Consortium. Nat Biotechnol. 2020 Jul;38(7):791-797. doi: 10.1038/s41587-020-0583-3. Nat Biotechnol. 2020. PMID: 32555529 No abstract available.
An essential and highly selective protein import pathway encoded by nucleus-forming phage.
Morgan CJ, Enustun E, Armbruster EG, Birkholz EA, Prichard A, Forman T, Aindow A, Wannasrichan W, Peters S, Inlow K, Shepherd IL, Razavilar A, Chaikeeratisak V, Adler BA, Cress BF, Doudna JA, Pogliano K, Villa E, Corbett KD, Pogliano J. Morgan CJ, et al. Among authors: doudna ja. Proc Natl Acad Sci U S A. 2024 May 7;121(19):e2321190121. doi: 10.1073/pnas.2321190121. Epub 2024 Apr 30. Proc Natl Acad Sci U S A. 2024. PMID: 38687783 Free PMC article.
RNA language models predict mutations that improve RNA function.
Shulgina Y, Trinidad MI, Langeberg CJ, Nisonoff H, Chithrananda S, Skopintsev P, Nissley AJ, Patel J, Boger RS, Shi H, Yoon PH, Doherty EE, Pande T, Iyer AM, Doudna JA, Cate JHD. Shulgina Y, et al. Among authors: doudna ja. bioRxiv [Preprint]. 2024 Apr 6:2024.04.05.588317. doi: 10.1101/2024.04.05.588317. bioRxiv. 2024. PMID: 38617247 Free PMC article. Preprint.
An essential and highly selective protein import pathway encoded by nucleus-forming phage.
Morgan CJ, Enustun E, Armbruster EG, Birkholz EA, Prichard A, Forman T, Aindow A, Wannasrichan W, Peters S, Inlow K, Shepherd IL, Razavilar A, Chaikeeratisak V, Adler BA, Cress BF, Doudna JA, Pogliano K, Villa E, Corbett KD, Pogliano J. Morgan CJ, et al. Among authors: doudna ja. bioRxiv [Preprint]. 2024 Mar 21:2024.03.21.585822. doi: 10.1101/2024.03.21.585822. bioRxiv. 2024. PMID: 38562762 Free PMC article. Updated. Preprint.
A phage nucleus-associated RNA-binding protein is required for jumbo phage infection.
Enustun E, Armbruster EG, Lee J, Zhang S, Yee BA, Malukhina K, Gu Y, Deep A, Naritomi JT, Liang Q, Aigner S, Adler BA, Cress BF, Doudna JA, Chaikeeratisak V, Cleveland DW, Ghassemian M, Bintu B, Yeo GW, Pogliano J, Corbett KD. Enustun E, et al. Among authors: doudna ja. Nucleic Acids Res. 2024 May 8;52(8):4440-4455. doi: 10.1093/nar/gkae216. Nucleic Acids Res. 2024. PMID: 38554115 Free PMC article.
Hachiman is a genome integrity sensor.
Tuck OT, Adler BA, Armbruster EG, Lahiri A, Hu JJ, Zhou J, Pogliano J, Doudna JA. Tuck OT, et al. Among authors: doudna ja. bioRxiv [Preprint]. 2024 Feb 29:2024.02.29.582594. doi: 10.1101/2024.02.29.582594. bioRxiv. 2024. PMID: 38464307 Free PMC article. Preprint.
375 results