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Pacybara: accurate long-read sequencing for barcoded mutagenized allelic libraries.
Weile J, Ferra G, Boyle G, Pendyala S, Amorosi C, Yeh CL, Cote AG, Kishore N, Tabet D, van Loggerenberg W, Rayhan A, Fowler DM, Dunham MJ, Roth FP. Weile J, et al. Among authors: dunham mj. Bioinformatics. 2024 Mar 29;40(4):btae182. doi: 10.1093/bioinformatics/btae182. Bioinformatics. 2024. PMID: 38569896 Free PMC article.
Template switching between the leading and lagging strands at replication forks generates inverted copy number variants through hairpin-capped extrachromosomal DNA.
Martin R, Espinoza CY, Large CRL, Rosswork J, Van Bruinisse C, Miller AW, Sanchez JC, Miller M, Paskvan S, Alvino GM, Dunham MJ, Raghuraman MK, Brewer BJ. Martin R, et al. Among authors: dunham mj. PLoS Genet. 2024 Jan 4;20(1):e1010850. doi: 10.1371/journal.pgen.1010850. eCollection 2024 Jan. PLoS Genet. 2024. PMID: 38175823 Free PMC article.
Systematic profiling of ale yeast protein dynamics across fermentation and repitching.
Garge RK, Geck RC, Armstrong JO, Dunn B, Boutz DR, Battenhouse A, Leutert M, Dang V, Jiang P, Kwiatkowski D, Peiser T, McElroy H, Marcotte EM, Dunham MJ. Garge RK, et al. Among authors: dunham mj. G3 (Bethesda). 2024 Mar 6;14(3):jkad293. doi: 10.1093/g3journal/jkad293. G3 (Bethesda). 2024. PMID: 38135291 Free PMC article.
Response to Luzzatto et al.
Geck RC, Powell NR, Dunham MJ. Geck RC, et al. Among authors: dunham mj. Am J Hum Genet. 2023 Nov 2;110(11):1986. doi: 10.1016/j.ajhg.2023.10.004. Am J Hum Genet. 2023. PMID: 37922886 Free PMC article. No abstract available.
Systematic Profiling of Ale Yeast Protein Dynamics across Fermentation and Repitching.
Garge RK, Geck RC, Armstrong JO, Dunn B, Boutz DR, Battenhouse A, Leutert M, Dang V, Jiang P, Kwiatkowski D, Peiser T, McElroy H, Marcotte EM, Dunham MJ. Garge RK, et al. Among authors: dunham mj. bioRxiv [Preprint]. 2023 Sep 30:2023.09.21.558736. doi: 10.1101/2023.09.21.558736. bioRxiv. 2023. PMID: 37790497 Free PMC article. Updated. Preprint.
115 results