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RIP-chip enrichment analysis.
Erhard F, Dölken L, Zimmer R. Erhard F, et al. Bioinformatics. 2013 Jan 1;29(1):77-83. doi: 10.1093/bioinformatics/bts631. Epub 2012 Oct 26. Bioinformatics. 2013. PMID: 23104891
Widespread context dependency of microRNA-mediated regulation.
Erhard F, Haas J, Lieber D, Malterer G, Jaskiewicz L, Zavolan M, Dölken L, Zimmer R. Erhard F, et al. Genome Res. 2014 Jun;24(6):906-19. doi: 10.1101/gr.166702.113. Epub 2014 Mar 25. Genome Res. 2014. PMID: 24668909 Free PMC article.
Widespread disruption of host transcription termination in HSV-1 infection.
Rutkowski AJ, Erhard F, L'Hernault A, Bonfert T, Schilhabel M, Crump C, Rosenstiel P, Efstathiou S, Zimmer R, Friedel CC, Dölken L. Rutkowski AJ, et al. Among authors: erhard f. Nat Commun. 2015 May 20;6:7126. doi: 10.1038/ncomms8126. Nat Commun. 2015. PMID: 25989971 Free PMC article.
Improved Ribo-seq enables identification of cryptic translation events.
Erhard F, Halenius A, Zimmermann C, L'Hernault A, Kowalewski DJ, Weekes MP, Stevanovic S, Zimmer R, Dölken L. Erhard F, et al. Nat Methods. 2018 May;15(5):363-366. doi: 10.1038/nmeth.4631. Epub 2018 Mar 12. Nat Methods. 2018. PMID: 29529017 Free PMC article.
HSV-1-induced disruption of transcription termination resembles a cellular stress response but selectively increases chromatin accessibility downstream of genes.
Hennig T, Michalski M, Rutkowski AJ, Djakovic L, Whisnant AW, Friedl MS, Jha BA, Baptista MAP, L'Hernault A, Erhard F, Dölken L, Friedel CC. Hennig T, et al. Among authors: erhard f. PLoS Pathog. 2018 Mar 26;14(3):e1006954. doi: 10.1371/journal.ppat.1006954. eCollection 2018 Mar. PLoS Pathog. 2018. PMID: 29579120 Free PMC article.
Dissecting newly transcribed and old RNA using GRAND-SLAM.
Jürges C, Dölken L, Erhard F. Jürges C, et al. Among authors: erhard f. Bioinformatics. 2018 Jul 1;34(13):i218-i226. doi: 10.1093/bioinformatics/bty256. Bioinformatics. 2018. PMID: 29949974 Free PMC article.
A MYC-GCN2-eIF2α negative feedback loop limits protein synthesis to prevent MYC-dependent apoptosis in colorectal cancer.
Schmidt S, Gay D, Uthe FW, Denk S, Paauwe M, Matthes N, Diefenbacher ME, Bryson S, Warrander FC, Erhard F, Ade CP, Baluapuri A, Walz S, Jackstadt R, Ford C, Vlachogiannis G, Valeri N, Otto C, Schülein-Völk C, Maurus K, Schmitz W, Knight JRP, Wolf E, Strathdee D, Schulze A, Germer CT, Rosenwald A, Sansom OJ, Eilers M, Wiegering A. Schmidt S, et al. Among authors: erhard f. Nat Cell Biol. 2019 Nov;21(11):1413-1424. doi: 10.1038/s41556-019-0408-0. Epub 2019 Nov 4. Nat Cell Biol. 2019. PMID: 31685988 Free PMC article.
59 results