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FOXC2 promotes vasculogenic mimicry and resistance to anti-angiogenic therapy.
Cell Rep. 2023 Aug 29;42(8):112791. doi: 10.1016/j.celrep.2023.112791. Epub 2023 Jul 26.
Cell Rep. 2023.
PMID: 37499655
Free article.
Single-cell genomic variation induced by mutational processes in cancer.
Funnell T, O'Flanagan CH, Williams MJ, McPherson A, McKinney S, Kabeer F, Lee H, Salehi S, Vázquez-García I, Shi H, Leventhal E, Masud T, Eirew P, Yap D, Zhang AW, Lim JLP, Wang B, Brimhall J, Biele J, Ting J, Au V, Van Vliet M, Liu YF, Beatty S, Lai D, Pham J, Grewal D, Abrams D, Havasov E, Leung S, Bojilova V, Moore RA, Rusk N, Uhlitz F, Ceglia N, Weiner AC, Zaikova E, Douglas JM, Zamarin D, Weigelt B, Kim SH, Da Cruz Paula A, Reis-Filho JS, Martin SD, Li Y, Xu H, de Algara TR, Lee SR, Llanos VC, Huntsman DG, McAlpine JN; IMAXT Consortium; Shah SP, Aparicio S.
Funnell T, et al.
Nature. 2022 Dec;612(7938):106-115. doi: 10.1038/s41586-022-05249-0. Epub 2022 Oct 26.
Nature. 2022.
PMID: 36289342
Free PMC article.
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Clonal fitness inferred from time-series modelling of single-cell cancer genomes.
Salehi S, Kabeer F, Ceglia N, Andronescu M, Williams MJ, Campbell KR, Masud T, Wang B, Biele J, Brimhall J, Gee D, Lee H, Ting J, Zhang AW, Tran H, O'Flanagan C, Dorri F, Rusk N, de Algara TR, Lee SR, Cheng BYC, Eirew P, Kono T, Pham J, Grewal D, Lai D, Moore R, Mungall AJ, Marra MA; IMAXT Consortium; McPherson A, Bouchard-Côté A, Aparicio S, Shah SP.
Salehi S, et al.
Nature. 2021 Jul;595(7868):585-590. doi: 10.1038/s41586-021-03648-3. Epub 2021 Jun 23.
Nature. 2021.
PMID: 34163070
Free PMC article.
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Clonal transcriptomics identifies mechanisms of chemoresistance and empowers rational design of combination therapies.
Wild SA, Cannell IG, Nicholls A, Kania K, Bressan D; CRUK IMAXT Grand Challenge Team; Hannon GJ, Sawicka K.
Wild SA, et al.
Elife. 2022 Dec 16;11:e80981. doi: 10.7554/eLife.80981.
Elife. 2022.
PMID: 36525288
Free PMC article.
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Combining long-term circuit mapping and network transcriptomics with SiR-N2c.
Lee H, Ciabatti E, González-Rueda A, Williams E, Nugent F, Mookerjee S, Morgese F, Tripodi M.
Lee H, et al. Among authors: nugent f.
Nat Methods. 2023 Apr;20(4):580-589. doi: 10.1038/s41592-023-01787-1. Epub 2023 Mar 2.
Nat Methods. 2023.
PMID: 36864202
Free PMC article.
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Activating PTEN Tumor Suppressor Expression with the CRISPR/dCas9 System.
Moses C, Nugent F, Waryah CB, Garcia-Bloj B, Harvey AR, Blancafort P.
Moses C, et al. Among authors: nugent f.
Mol Ther Nucleic Acids. 2019 Mar 1;14:287-300. doi: 10.1016/j.omtn.2018.12.003. Epub 2018 Dec 14.
Mol Ther Nucleic Acids. 2019.
PMID: 30654190
Free PMC article.
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Clonal Decomposition and DNA Replication States Defined by Scaled Single-Cell Genome Sequencing.
Laks E, McPherson A, Zahn H, Lai D, Steif A, Brimhall J, Biele J, Wang B, Masud T, Ting J, Grewal D, Nielsen C, Leung S, Bojilova V, Smith M, Golovko O, Poon S, Eirew P, Kabeer F, Ruiz de Algara T, Lee SR, Taghiyar MJ, Huebner C, Ngo J, Chan T, Vatrt-Watts S, Walters P, Abrar N, Chan S, Wiens M, Martin L, Scott RW, Underhill TM, Chavez E, Steidl C, Da Costa D, Ma Y, Coope RJN, Corbett R, Pleasance S, Moore R, Mungall AJ, Mar C, Cafferty F, Gelmon K, Chia S; CRUK IMAXT Grand Challenge Team; Marra MA, Hansen C, Shah SP, Aparicio S.
Laks E, et al.
Cell. 2019 Nov 14;179(5):1207-1221.e22. doi: 10.1016/j.cell.2019.10.026.
Cell. 2019.
PMID: 31730858
Free PMC article.
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