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ATOMDANCE: Kernel-based denoising and choreographic analysis for protein dynamic comparison.
Biophys J. 2024 Mar 21:S0006-3495(24)00204-2. doi: 10.1016/j.bpj.2024.03.024. Online ahead of print.
Biophys J. 2024.
PMID: 38515299
Statistical machine learning for comparative protein dynamics with the DROIDS/maxDemon software pipeline.
Babbitt GA, Fokoue EP, Srivastava HR, Callahan B, Rajendran M.
Babbitt GA, et al. Among authors: fokoue ep.
STAR Protoc. 2022 Feb 24;3(1):101194. doi: 10.1016/j.xpro.2022.101194. eCollection 2022 Mar 18.
STAR Protoc. 2022.
PMID: 35252883
Free PMC article.
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Function and evolution of B-Raf loop dynamics relevant to cancer recurrence under drug inhibition.
Babbitt GA, Lynch ML, McCoy M, Fokoue EP, Hudson AO.
Babbitt GA, et al. Among authors: fokoue ep.
J Biomol Struct Dyn. 2022 Jan;40(1):468-483. doi: 10.1080/07391102.2020.1815578. Epub 2020 Sep 8.
J Biomol Struct Dyn. 2022.
PMID: 32897175
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DROIDS 3.0-Detecting Genetic and Drug Class Variant Impact on Conserved Protein Binding Dynamics.
Babbitt GA, Fokoue EP, Evans JR, Diller KI, Adams LE.
Babbitt GA, et al. Among authors: fokoue ep.
Biophys J. 2020 Feb 4;118(3):541-551. doi: 10.1016/j.bpj.2019.12.008. Epub 2019 Dec 18.
Biophys J. 2020.
PMID: 31928763
Free PMC article.
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