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The use of in vitro peptide binding profiles and in silico ligand-receptor interaction profiles to describe ligand-induced conformations of the retinoid X receptor alpha ligand-binding domain.
Mol Endocrinol. 2007 Jan;21(1):30-48. doi: 10.1210/me.2006-0072. Epub 2006 Oct 12.
Mol Endocrinol. 2007.
PMID: 17038419
A family-based approach reveals the function of residues in the nuclear receptor ligand-binding domain.
Folkertsma S, van Noort P, Van Durme J, Joosten HJ, Bettler E, Fleuren W, Oliveira L, Horn F, de Vlieg J, Vriend G.
Folkertsma S, et al.
J Mol Biol. 2004 Aug 6;341(2):321-35. doi: 10.1016/j.jmb.2004.05.075.
J Mol Biol. 2004.
PMID: 15276826
Review.
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The nuclear receptor ligand-binding domain: a family-based structure analysis.
Folkertsma S, van Noort PI, Brandt RF, Bettler E, Vriend G, de Vlieg J.
Folkertsma S, et al.
Curr Med Chem. 2005;12(9):1001-16. doi: 10.2174/0929867053764699.
Curr Med Chem. 2005.
PMID: 15892635
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Computational design, synthesis, and evaluation of miniproteins as androgen receptor coactivator mimics.
Vaz B, Möcklinghoff S, Folkertsma S, Lusher S, de Vlieg J, Brunsveld L.
Vaz B, et al. Among authors: folkertsma s.
Chem Commun (Camb). 2009 Sep 28;(36):5377-9. doi: 10.1039/b910677d. Epub 2009 Aug 17.
Chem Commun (Camb). 2009.
PMID: 19724790
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NRMD: Nuclear Receptor Mutation Database.
Van Durme JJ, Bettler E, Folkertsma S, Horn F, Vriend G.
Van Durme JJ, et al. Among authors: folkertsma s.
Nucleic Acids Res. 2003 Jan 1;31(1):331-3. doi: 10.1093/nar/gkg122.
Nucleic Acids Res. 2003.
PMID: 12520016
Free PMC article.
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TAK1 activation of the mouse JunB promoter is mediated through a CCAAT box and NF-Y.
Eggen BJ, Benus GF, Folkertsma S, Jonk LJ, Kruijer W.
Eggen BJ, et al. Among authors: folkertsma s.
FEBS Lett. 2001 Oct 12;506(3):267-71. doi: 10.1016/s0014-5793(01)02928-3.
FEBS Lett. 2001.
PMID: 11602259
Free article.
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