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Transcriptome variation in human tissues revealed by long-read sequencing.
Nature. 2022 Aug;608(7922):353-359. doi: 10.1038/s41586-022-05035-y. Epub 2022 Aug 3.
Nature. 2022.
PMID: 35922509
Free PMC article.
A polyclonal allelic expression assay for detecting regulatory effects of transcript variants.
Brandt M, Gokden A, Ziosi M, Lappalainen T.
Brandt M, et al. Among authors: gokden a.
Genome Med. 2020 Sep 11;12(1):79. doi: 10.1186/s13073-020-00777-8.
Genome Med. 2020.
PMID: 32912286
Free PMC article.
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An autoimmune disease risk variant: A trans master regulatory effect mediated by IRF1 under immune stimulation?
Brandt M, Kim-Hellmuth S, Ziosi M, Gokden A, Wolman A, Lam N, Recinos Y, Daniloski Z, Morris JA, Hornung V, Schumacher J, Lappalainen T.
Brandt M, et al. Among authors: gokden a.
PLoS Genet. 2021 Jul 27;17(7):e1009684. doi: 10.1371/journal.pgen.1009684. eCollection 2021 Jul.
PLoS Genet. 2021.
PMID: 34314424
Free PMC article.
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Capture Sequencing Enables Sensitive Detection of Tick-Borne Agents in Human Blood.
Sanchez-Vicente S, Jain K, Tagliafierro T, Gokden A, Kapoor V, Guo C, Horn EJ, Lipkin WI, Tokarz R.
Sanchez-Vicente S, et al. Among authors: gokden a.
Front Microbiol. 2022 Mar 7;13:837621. doi: 10.3389/fmicb.2022.837621. eCollection 2022.
Front Microbiol. 2022.
PMID: 35330765
Free PMC article.
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SARS-CoV-2 Sequence Analysis during COVID-19 Case Surge, Liberia, 2021.
Shobayo B, Mishra M, Sameroff S, Petrosov A, Ng J, Gokden A, MaCauley J, Jain K, Renken C, Duworko JT, Badio M, Jallah W, Hensley L, Briese T, Lipkin WI, Mishra N.
Shobayo B, et al. Among authors: gokden a.
Emerg Infect Dis. 2021 Dec;27(12):3185-3188. doi: 10.3201/eid2712.211818. Epub 2021 Oct 28.
Emerg Infect Dis. 2021.
PMID: 34708683
Free PMC article.
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Development of a capture sequencing assay for enhanced detection and genotyping of tick-borne pathogens.
Jain K, Tagliafierro T, Marques A, Sanchez-Vicente S, Gokden A, Fallon B, Mishra N, Briese T, Kapoor V, Sameroff S, Guo C, Marcos LA, Hu L, Lipkin WI, Tokarz R.
Jain K, et al. Among authors: gokden a.
Sci Rep. 2021 Jun 11;11(1):12384. doi: 10.1038/s41598-021-91956-z.
Sci Rep. 2021.
PMID: 34117323
Free PMC article.
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Evaluation of noninvasive biospecimens for transcriptome studies.
Martorella M, Kasela S, Garcia-Flores R, Gokden A, Castel SE, Lappalainen T.
Martorella M, et al. Among authors: gokden a.
BMC Genomics. 2023 Dec 19;24(1):790. doi: 10.1186/s12864-023-09875-4.
BMC Genomics. 2023.
PMID: 38114913
Free PMC article.
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Tension promotes kinetochore-microtubule release by Aurora B kinase.
Chen GY, Renda F, Zhang H, Gokden A, Wu DZ, Chenoweth DM, Khodjakov A, Lampson MA.
Chen GY, et al. Among authors: gokden a.
J Cell Biol. 2021 Jun 7;220(6):e202007030. doi: 10.1083/jcb.202007030.
J Cell Biol. 2021.
PMID: 33904910
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