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Chapter 2: Data-driven view of disease biology.
Greene CS, Troyanskaya OG. Greene CS, et al. PLoS Comput Biol. 2012;8(12):e1002816. doi: 10.1371/journal.pcbi.1002816. Epub 2012 Dec 27. PLoS Comput Biol. 2012. PMID: 23300408 Free PMC article.
Defining cell-type specificity at the transcriptional level in human disease.
Ju W, Greene CS, Eichinger F, Nair V, Hodgin JB, Bitzer M, Lee YS, Zhu Q, Kehata M, Li M, Jiang S, Rastaldi MP, Cohen CD, Troyanskaya OG, Kretzler M. Ju W, et al. Among authors: greene cs. Genome Res. 2013 Nov;23(11):1862-73. doi: 10.1101/gr.155697.113. Epub 2013 Aug 15. Genome Res. 2013. PMID: 23950145 Free PMC article.
Targeted exploration and analysis of large cross-platform human transcriptomic compendia.
Zhu Q, Wong AK, Krishnan A, Aure MR, Tadych A, Zhang R, Corney DC, Greene CS, Bongo LA, Kristensen VN, Charikar M, Li K, Troyanskaya OG. Zhu Q, et al. Among authors: greene cs. Nat Methods. 2015 Mar;12(3):211-4, 3 p following 214. doi: 10.1038/nmeth.3249. Epub 2015 Jan 12. Nat Methods. 2015. PMID: 25581801 Free PMC article.
Understanding multicellular function and disease with human tissue-specific networks.
Greene CS, Krishnan A, Wong AK, Ricciotti E, Zelaya RA, Himmelstein DS, Zhang R, Hartmann BM, Zaslavsky E, Sealfon SC, Chasman DI, FitzGerald GA, Dolinski K, Grosser T, Troyanskaya OG. Greene CS, et al. Nat Genet. 2015 Jun;47(6):569-76. doi: 10.1038/ng.3259. Epub 2015 Apr 27. Nat Genet. 2015. PMID: 25915600 Free PMC article.
Voices in methods development.
Anikeeva P, Boyden E, Brangwynne C, Cissé II, Fiehn O, Fromme P, Gingras AC, Greene CS, Heard E, Hell SW, Hillman E, Jensen GJ, Karchin R, Kiessling LL, Kleinstiver BP, Knight R, Kukura P, Lancaster MA, Loman N, Looger L, Lundberg E, Luo Q, Miyawaki A, Myers EW Jr, Nolan GP, Picotti P, Reik W, Sauer M, Shalek AK, Shendure J, Slavov N, Tanay A, Troyanskaya O, van Valen D, Wang HW, Yi C, Yin P, Zernicka-Goetz M, Zhuang X. Anikeeva P, et al. Among authors: greene cs. Nat Methods. 2019 Oct;16(10):945-951. doi: 10.1038/s41592-019-0585-6. Nat Methods. 2019. PMID: 31562479 Free PMC article.
302 results