Grosse I - Search Results

1

VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees.

Grau J, Ben-Gal I, Posch S, Grosse I. Grau J, et al. Among authors: grosse i. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W529-33. doi: 10.1093/nar/gkl212. Nucleic Acids Res. 2006. PMID: 16845064 Free PMC article.

2

Identification of transcription factor binding sites with variable-order Bayesian networks.

Ben-Gal I, Shani A, Gohr A, Grau J, Arviv S, Shmilovici A, Posch S, Grosse I. Ben-Gal I, et al. Among authors: grosse i. Bioinformatics. 2005 Jun 1;21(11):2657-66. doi: 10.1093/bioinformatics/bti410. Epub 2005 Mar 29. Bioinformatics. 2005. PMID: 15797905

3

Recognition of cis-regulatory elements with vombat.

Posch S, Grau J, Gohr A, Ben-Gal I, Kel AE, Grosse I. Posch S, et al. Among authors: grosse i. J Bioinform Comput Biol. 2007 Apr;5(2B):561-77. doi: 10.1142/s0219720007002886. J Bioinform Comput Biol. 2007. PMID: 17636862

4

Unifying generative and discriminative learning principles.

Keilwagen J, Grau J, Posch S, Strickert M, Grosse I. Keilwagen J, et al. Among authors: grosse i. BMC Bioinformatics. 2010 Feb 22;11:98. doi: 10.1186/1471-2105-11-98. BMC Bioinformatics. 2010. PMID: 20175896 Free PMC article.

5

Apples and oranges: avoiding different priors in Bayesian DNA sequence analysis.

Keilwagen J, Grau J, Posch S, Grosse I. Keilwagen J, et al. Among authors: grosse i. BMC Bioinformatics. 2010 Mar 22;11:149. doi: 10.1186/1471-2105-11-149. BMC Bioinformatics. 2010. PMID: 20307305 Free PMC article.

6

Probabilistic approaches to transcription factor binding site prediction.

Posch S, Grau J, Gohr A, Keilwagen J, Grosse I. Posch S, et al. Among authors: grosse i. Methods Mol Biol. 2010;674:97-119. doi: 10.1007/978-1-60761-854-6_7. Methods Mol Biol. 2010. PMID: 20827588

7

De-novo discovery of differentially abundant transcription factor binding sites including their positional preference.

Keilwagen J, Grau J, Paponov IA, Posch S, Strickert M, Grosse I. Keilwagen J, et al. Among authors: grosse i. PLoS Comput Biol. 2011 Feb 10;7(2):e1001070. doi: 10.1371/journal.pcbi.1001070. PLoS Comput Biol. 2011. PMID: 21347314 Free PMC article.

8

Evaluation of methods for modeling transcription factor sequence specificity.

Weirauch MT, Cote A, Norel R, Annala M, Zhao Y, Riley TR, Saez-Rodriguez J, Cokelaer T, Vedenko A, Talukder S; DREAM5 Consortium; Bussemaker HJ, Morris QD, Bulyk ML, Stolovitzky G, Hughes TR. Weirauch MT, et al. Nat Biotechnol. 2013 Feb;31(2):126-34. doi: 10.1038/nbt.2486. Epub 2013 Jan 27. Nat Biotechnol. 2013. PMID: 23354101 Free PMC article.

9

Critical assessment of automated flow cytometry data analysis techniques.

Aghaeepour N, Finak G; FlowCAP Consortium; DREAM Consortium; Hoos H, Mosmann TR, Brinkman R, Gottardo R, Scheuermann RH. Aghaeepour N, et al. Nat Methods. 2013 Mar;10(3):228-38. doi: 10.1038/nmeth.2365. Epub 2013 Feb 10. Nat Methods. 2013. PMID: 23396282 Free PMC article.

10

Dispom: a discriminative de-novo motif discovery tool based on the jstacs library.

Grau J, Keilwagen J, Gohr A, Paponov IA, Posch S, Seifert M, Strickert M, Grosse I. Grau J, et al. Among authors: grosse i. J Bioinform Comput Biol. 2013 Feb;11(1):1340006. doi: 10.1142/S0219720013400064. Epub 2013 Jan 21. J Bioinform Comput Biol. 2013. PMID: 23427988

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