Heinäniemi M - Search Results

1

Integrated metabolic modelling reveals cell-type specific epigenetic control points of the macrophage metabolic network.

Pacheco MP, John E, Kaoma T, Heinäniemi M, Nicot N, Vallar L, Bueb JL, Sinkkonen L, Sauter T. Pacheco MP, et al. Among authors: heinaniemi m. BMC Genomics. 2015 Oct 19;16:809. doi: 10.1186/s12864-015-1984-4. BMC Genomics. 2015. PMID: 26480823 Free PMC article.

2

Time-resolved expression profiling of the nuclear receptor superfamily in human adipogenesis.

Lahnalampi M, Heinäniemi M, Sinkkonen L, Wabitsch M, Carlberg C. Lahnalampi M, et al. Among authors: heinaniemi m. PLoS One. 2010 Sep 27;5(9):e12991. doi: 10.1371/journal.pone.0012991. PLoS One. 2010. PMID: 20885999 Free PMC article.

3

Dataset integration identifies transcriptional regulation of microRNA genes by PPARγ in differentiating mouse 3T3-L1 adipocytes.

John E, Wienecke-Baldacchino A, Liivrand M, Heinäniemi M, Carlberg C, Sinkkonen L. John E, et al. Among authors: heinaniemi m. Nucleic Acids Res. 2012 May;40(10):4446-60. doi: 10.1093/nar/gks025. Epub 2012 Feb 7. Nucleic Acids Res. 2012. PMID: 22319216 Free PMC article.

4

Gene-pair expression signatures reveal lineage control.

Heinäniemi M, Nykter M, Kramer R, Wienecke-Baldacchino A, Sinkkonen L, Zhou JX, Kreisberg R, Kauffman SA, Huang S, Shmulevich I. Heinäniemi M, et al. Nat Methods. 2013 Jun;10(6):577-83. doi: 10.1038/nmeth.2445. Epub 2013 Apr 21. Nat Methods. 2013. PMID: 23603899 Free PMC article.

5

Integrated analysis of transcript-level regulation of metabolism reveals disease-relevant nodes of the human metabolic network.

Galhardo M, Sinkkonen L, Berninger P, Lin J, Sauter T, Heinäniemi M. Galhardo M, et al. Among authors: heinaniemi m. Nucleic Acids Res. 2014 Feb;42(3):1474-96. doi: 10.1093/nar/gkt989. Epub 2013 Nov 5. Nucleic Acids Res. 2014. PMID: 24198249 Free PMC article.

6

Combinatorial regulation of lipoprotein lipase by microRNAs during mouse adipogenesis.

Bouvy-Liivrand M, Heinäniemi M, John E, Schneider JG, Sauter T, Sinkkonen L. Bouvy-Liivrand M, et al. Among authors: heinaniemi m. RNA Biol. 2014;11(1):76-91. doi: 10.4161/rna.27655. Epub 2014 Jan 16. RNA Biol. 2014. PMID: 24457907 Free PMC article.

7

Systems genomics evaluation of the SH-SY5Y neuroblastoma cell line as a model for Parkinson's disease.

Krishna A, Biryukov M, Trefois C, Antony PM, Hussong R, Lin J, Heinäniemi M, Glusman G, Köglsberger S, Boyd O, van den Berg BH, Linke D, Huang D, Wang K, Hood L, Tholey A, Schneider R, Galas DJ, Balling R, May P. Krishna A, et al. Among authors: heinaniemi m. BMC Genomics. 2014 Dec 20;15(1):1154. doi: 10.1186/1471-2164-15-1154. BMC Genomics. 2014. PMID: 25528190 Free PMC article.

8

ChIP-seq profiling of the active chromatin marker H3K4me3 and PPARγ, CEBPα and LXR target genes in human SGBS adipocytes.

Galhardo M, Sinkkonen L, Berninger P, Lin J, Sauter T, Heinäniemi M. Galhardo M, et al. Among authors: heinaniemi m. Genom Data. 2014 Aug 6;2:230-6. doi: 10.1016/j.gdata.2014.07.002. eCollection 2014 Dec. Genom Data. 2014. PMID: 26484099 Free PMC article.

9

Transcriptomics profiling of human SGBS adipogenesis.

Galhardo M, Sinkkonen L, Berninger P, Lin J, Sauter T, Heinäniemi M. Galhardo M, et al. Among authors: heinaniemi m. Genom Data. 2014 Aug 7;2:246-8. doi: 10.1016/j.gdata.2014.07.004. eCollection 2014 Dec. Genom Data. 2014. PMID: 26484102 Free PMC article.

10

Analysis of primary microRNA loci from nascent transcriptomes reveals regulatory domains governed by chromatin architecture.

Bouvy-Liivrand M, Hernández de Sande A, Pölönen P, Mehtonen J, Vuorenmaa T, Niskanen H, Sinkkonen L, Kaikkonen MU, Heinäniemi M. Bouvy-Liivrand M, et al. Among authors: heinaniemi m. Nucleic Acids Res. 2017 Sep 29;45(17):9837-9849. doi: 10.1093/nar/gkx680. Nucleic Acids Res. 2017. PMID: 28973462 Free PMC article.

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